Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 EEF1D-248ENST00000533494 758 ntTSL 511.9□□□□□ -0.57e-10■■■□□ 17.8
CSTF2TQ9H0L4 EEF1D-226ENST00000529516 473 ntTSL 38.61□□□□□ -1.037e-10■■■□□ 17.8
CSTF2TQ9H0L4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.061e-6■■■□□ 17.8
CSTF2TQ9H0L4 PPP2R2D-202ENST00000470416 6203 ntTSL 1 (best)10.28□□□□□ -0.761e-6■■■□□ 17.8
CSTF2TQ9H0L4 ARVCF-207ENST00000473551 2108 ntTSL 217.47■□□□□ 0.399e-7■■■□□ 17.8
CSTF2TQ9H0L4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.169e-7■■■□□ 17.8
CSTF2TQ9H0L4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.3■■□□□ 12e-7■■■□□ 17.8
CSTF2TQ9H0L4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.242e-7■■■□□ 17.8
CSTF2TQ9H0L4 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.11□□□□□ -1.432e-6■■■□□ 17.8
CSTF2TQ9H0L4 PFKL-207ENST00000474114 6007 ntTSL 1 (best)17.72■□□□□ 0.436e-8■■■□□ 17.8
CSTF2TQ9H0L4 FAM207A-205ENST00000485207 504 ntTSL 213.48□□□□□ -0.253e-6■■■□□ 17.8
CSTF2TQ9H0L4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.332e-6■■■□□ 17.8
CSTF2TQ9H0L4 MELTF-203ENST00000439320 629 ntTSL 316.72■□□□□ 0.272e-6■■■□□ 17.8
CSTF2TQ9H0L4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.072e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.492e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.62■□□□□ 0.092e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.65□□□□□ -0.062e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.64□□□□□ -0.072e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-203ENST00000505526 1484 ntTSL 1 (best)14.62□□□□□ -0.072e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.452e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.27□□□□□ -0.452e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-210ENST00000513582 3500 ntTSL 210.91□□□□□ -0.662e-6■■■□□ 17.8
CSTF2TQ9H0L4 PDCD6-205ENST00000507473 486 ntTSL 36.9□□□□□ -1.32e-6■■■□□ 17.8
CSTF2TQ9H0L4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.571e-7■■■□□ 17.8
CSTF2TQ9H0L4 RORA-206ENST00000557822 545 ntTSL 414.67□□□□□ -0.061e-7■■■□□ 17.8
CSTF2TQ9H0L4 RORA-210ENST00000559343 577 ntTSL 411.71□□□□□ -0.531e-7■■■□□ 17.8
CSTF2TQ9H0L4 RORA-212ENST00000560004 544 ntTSL 410.44□□□□□ -0.741e-7■■■□□ 17.8
CSTF2TQ9H0L4 RORA-207ENST00000558234 3910 ntTSL 1 (best)10.28□□□□□ -0.761e-7■■■□□ 17.8
CSTF2TQ9H0L4 RORA-205ENST00000551975 749 ntTSL 39.5□□□□□ -0.891e-7■■■□□ 17.8
CSTF2TQ9H0L4 RORA-202ENST00000309157 1908 ntTSL 1 (best) BASIC8.27□□□□□ -1.091e-7■■■□□ 17.8
CSTF2TQ9H0L4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.331e-7■■■□□ 17.8
CSTF2TQ9H0L4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.43□□□□□ -1.381e-7■■■□□ 17.8
CSTF2TQ9H0L4 PRRT2-206ENST00000568516 534 ntTSL 427.25■■□□□ 1.952e-6■■■□□ 17.8
CSTF2TQ9H0L4 CSRNP1-202ENST00000514182 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.682e-6■■■□□ 17.8
CSTF2TQ9H0L4 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.966e-10■■■□□ 17.8
CSTF2TQ9H0L4 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.036e-10■■■□□ 17.8
CSTF2TQ9H0L4 SNRK-206ENST00000468628 470 ntTSL 37.78□□□□□ -1.166e-10■■■□□ 17.8
CSTF2TQ9H0L4 SUN1-212ENST00000429178 3701 ntTSL 1 (best)10.32□□□□□ -0.762e-6■■■□□ 17.8
CSTF2TQ9H0L4 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.88e-7■■■□□ 17.8
CSTF2TQ9H0L4 ARRDC1-205ENST00000466367 866 ntTSL 1 (best)20.07■□□□□ 0.88e-7■■■□□ 17.8
CSTF2TQ9H0L4 ARRDC1-202ENST00000419386 829 ntTSL 319.91■□□□□ 0.788e-7■■■□□ 17.8
CSTF2TQ9H0L4 ARRDC1-204ENST00000461627 882 ntTSL 219.65■□□□□ 0.748e-7■■■□□ 17.8
CSTF2TQ9H0L4 ARRDC1-207ENST00000471125 612 ntTSL 319.65■□□□□ 0.748e-7■■■□□ 17.8
CSTF2TQ9H0L4 ARRDC1-211ENST00000495220 747 ntTSL 218.64■□□□□ 0.578e-7■■■□□ 17.8
CSTF2TQ9H0L4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18■□□□□ 0.478e-7■■■□□ 17.8
CSTF2TQ9H0L4 ARRDC1-203ENST00000431925 555 ntTSL 317.05■□□□□ 0.328e-7■■■□□ 17.8
CSTF2TQ9H0L4 ARRDC1-209ENST00000483563 704 ntTSL 317.04■□□□□ 0.328e-7■■■□□ 17.8
CSTF2TQ9H0L4 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.261e-6■■■□□ 17.8
CSTF2TQ9H0L4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.321e-6■■■□□ 17.8
CSTF2TQ9H0L4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.951e-6■■■□□ 17.8
CSTF2TQ9H0L4 ARVCF-206ENST00000467828 258 ntTSL 317.98■□□□□ 0.471e-6■■■□□ 17.8
CSTF2TQ9H0L4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.081e-6■■■□□ 17.8
CSTF2TQ9H0L4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.879e-7■■■□□ 17.8
CSTF2TQ9H0L4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.799e-7■■■□□ 17.8
CSTF2TQ9H0L4 TRMT2A-210ENST00000464535 943 ntTSL 218.68■□□□□ 0.583e-9■■■□□ 17.8
CSTF2TQ9H0L4 TRMT2A-207ENST00000445045 582 ntTSL 417.5■□□□□ 0.393e-9■■■□□ 17.8
CSTF2TQ9H0L4 TMEM259-205ENST00000586704 2538 ntTSL 516.53■□□□□ 0.249e-7■■■□□ 17.8
CSTF2TQ9H0L4 TRMT2A-219ENST00000494641 1060 ntTSL 316.46■□□□□ 0.233e-9■■■□□ 17.8
CSTF2TQ9H0L4 LARP4-208ENST00000520064 2068 ntTSL 510.82□□□□□ -0.683e-9■■■□□ 17.8
CSTF2TQ9H0L4 PARP4-201ENST00000381989 5474 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.115e-12■■■□□ 17.8
CSTF2TQ9H0L4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.98■□□□□ 0.311e-6■■■□□ 17.8
CSTF2TQ9H0L4 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.541e-6■■■□□ 17.8
CSTF2TQ9H0L4 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC11.51□□□□□ -0.571e-6■■■□□ 17.8
CSTF2TQ9H0L4 POFUT2-202ENST00000334538 3077 ntTSL 1 (best)11.48□□□□□ -0.571e-6■■■□□ 17.8
CSTF2TQ9H0L4 FAM20C-204ENST00000512382 1018 ntTSL 213.64□□□□□ -0.231e-8■■■□□ 17.8
CSTF2TQ9H0L4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.289e-7■■■□□ 17.8
CSTF2TQ9H0L4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.25□□□□□ -0.293e-7■■■□□ 17.8
CSTF2TQ9H0L4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.144e-11■■■□□ 17.8
CSTF2TQ9H0L4 CBFA2T3-204ENST00000563640 664 ntTSL 214.69□□□□□ -0.065e-7■■■□□ 17.8
CSTF2TQ9H0L4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.82■□□□□ 0.283e-13■■■□□ 17.7
CSTF2TQ9H0L4 RBCK1-209ENST00000415942 2613 ntTSL 516.58■□□□□ 0.243e-13■■■□□ 17.7
CSTF2TQ9H0L4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.08■□□□□ 0.173e-13■■■□□ 17.7
CSTF2TQ9H0L4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.123e-13■■■□□ 17.7
CSTF2TQ9H0L4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.85□□□□□ -0.033e-13■■■□□ 17.7
CSTF2TQ9H0L4 RBCK1-204ENST00000382214 2752 ntTSL 1 (best)14.13□□□□□ -0.153e-13■■■□□ 17.7
CSTF2TQ9H0L4 PPP2R2D-207ENST00000616467 2058 ntTSL 1 (best)22.96■■□□□ 1.277e-7■■■□□ 17.7
CSTF2TQ9H0L4 PPP2R2D-204ENST00000482010 1792 ntTSL 216.92■□□□□ 0.37e-7■■■□□ 17.7
CSTF2TQ9H0L4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.63■□□□□ 0.411e-6■■■□□ 17.7
CSTF2TQ9H0L4 TSC22D4-205ENST00000493217 2060 ntTSL 1 (best)17.23■□□□□ 0.351e-6■■■□□ 17.7
CSTF2TQ9H0L4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.051e-6■■■□□ 17.7
CSTF2TQ9H0L4 TRIM41-208ENST00000515499 914 ntTSL 319.26■□□□□ 0.675e-7■■■□□ 17.7
CSTF2TQ9H0L4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.42■□□□□ 0.225e-7■■■□□ 17.7
CSTF2TQ9H0L4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.155e-7■■■□□ 17.7
CSTF2TQ9H0L4 TRIM41-204ENST00000508930 3834 ntTSL 1 (best)13.61□□□□□ -0.235e-7■■■□□ 17.7
CSTF2TQ9H0L4 GRAMD1A-206ENST00000598073 582 ntTSL 310.64□□□□□ -0.717e-7■■■□□ 17.7
CSTF2TQ9H0L4 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.082e-6■■■□□ 17.7
CSTF2TQ9H0L4 UBALD1-207ENST00000591113 659 ntTSL 521.15■□□□□ 0.982e-8■■■□□ 17.7
CSTF2TQ9H0L4 GUK1-219ENST00000470040 2548 ntTSL 214.75□□□□□ -0.059e-10■■■□□ 17.7
CSTF2TQ9H0L4 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.47■□□□□ 0.074e-13■■■□□ 17.7
CSTF2TQ9H0L4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.02□□□□□ -0.171e-6■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-214ENST00000460905 715 ntTSL 521.55■■□□□ 1.042e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.09■□□□□ 0.652e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.36■□□□□ 0.372e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-216ENST00000462571 1784 ntTSL 1 (best)17.36■□□□□ 0.372e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-225ENST00000490803 1865 ntTSL 1 (best)17.31■□□□□ 0.362e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.1■□□□□ 0.332e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-227ENST00000495521 1565 ntTSL 1 (best)17.05■□□□□ 0.322e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-221ENST00000470987 1954 ntTSL 1 (best)16.83■□□□□ 0.282e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-215ENST00000460989 1521 ntTSL 1 (best)16.75■□□□□ 0.272e-9■■■□□ 17.7
CSTF2TQ9H0L4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.63■□□□□ 0.252e-9■■■□□ 17.7
Retrieved 100 of 19,151 protein–RNA pairs in 90.6 ms