RNA–Protein interactions for RNA: ENST00000468628.2

SNRK-206, Transcript of SNF related kinase, humanhuman

TSL 3

Gene SNRK, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRK-206ENST00000468628 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
SNRK-206ENST00000468628 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
SNRK-206ENST00000468628 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
SNRK-206ENST00000468628 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
SNRK-206ENST00000468628 ZCCHC6Q5VYS8 1495 aaKnown RBP15.67■□□□□ 0.1
SNRK-206ENST00000468628 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
SNRK-206ENST00000468628 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
SNRK-206ENST00000468628 PHF23Q9BUL5 403 aaPredicted RBP15.39■□□□□ 0.05
SNRK-206ENST00000468628 MYO15BQ96JP2 1530 aa15.17■□□□□ 0.02
SNRK-206ENST00000468628 SHROOM4Q9ULL8 1493 aa14.96□□□□□ -0.01
SNRK-206ENST00000468628 NACADO15069 1562 aa14.85□□□□□ -0.03
SNRK-206ENST00000468628 ABCC9O60706 1549 aa14.79□□□□□ -0.04
SNRK-206ENST00000468628 SCRIBQ14160 1630 aa14.64□□□□□ -0.07
SNRK-206ENST00000468628 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
SNRK-206ENST00000468628 RB1CC1Q8TDY2 1594 aa14.59□□□□□ -0.07
SNRK-206ENST00000468628 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
SNRK-206ENST00000468628 UNC13AQ9UPW8 1703 aa14.49□□□□□ -0.09
SNRK-206ENST00000468628 FOXD1Q16676 465 aa14.49□□□□□ -0.09
SNRK-206ENST00000468628 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
SNRK-206ENST00000468628 BAZ1AQ9NRL2 1556 aaPredicted RBP14.29□□□□□ -0.12
SNRK-206ENST00000468628 MROH2BQ7Z745 1585 aa14.24□□□□□ -0.13
SNRK-206ENST00000468628 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.13
SNRK-206ENST00000468628 WIZO95785 1651 aa14.2□□□□□ -0.14
SNRK-206ENST00000468628 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
SNRK-206ENST00000468628 BICRAQ9NZM4 1560 aa14.16□□□□□ -0.14
SNRK-206ENST00000468628 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
SNRK-206ENST00000468628 TOP2AP11388 1531 aaKnown RBP14.11□□□□□ -0.15
SNRK-206ENST00000468628 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
SNRK-206ENST00000468628 PLPPR3Q6T4P5 718 aa14.03□□□□□ -0.16
SNRK-206ENST00000468628 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
SNRK-206ENST00000468628 CCDC88BA6NC98 1476 aa13.85□□□□□ -0.19
SNRK-206ENST00000468628 ATAD2BQ9ULI0 1458 aa13.76□□□□□ -0.21
SNRK-206ENST00000468628 TRIM41Q8WV44 630 aa13.76□□□□□ -0.21
SNRK-206ENST00000468628 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
SNRK-206ENST00000468628 PRDM2Q13029 1718 aa13.72□□□□□ -0.21
SNRK-206ENST00000468628 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
SNRK-206ENST00000468628 BAZ1BQ9UIG0 1483 aaKnown RBP13.68□□□□□ -0.22
SNRK-206ENST00000468628 EEA1Q15075 1411 aa13.67□□□□□ -0.22
SNRK-206ENST00000468628 ABCC8Q09428 1581 aa13.66□□□□□ -0.22
SNRK-206ENST00000468628 ADRA2BP18089 450 aa13.64□□□□□ -0.23
SNRK-206ENST00000468628 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
SNRK-206ENST00000468628 LOC105371045A0A1W2PR82 267 aa13.62□□□□□ -0.23
SNRK-206ENST00000468628 BIVM-ERCC5R4GMW8 1640 aa13.61□□□□□ -0.23
SNRK-206ENST00000468628 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
SNRK-206ENST00000468628 PIAS4Q8N2W9 510 aaPredicted RBP13.56□□□□□ -0.24
SNRK-206ENST00000468628 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
SNRK-206ENST00000468628 KIF21BO75037 1637 aa13.55□□□□□ -0.24
SNRK-206ENST00000468628 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
SNRK-206ENST00000468628 WRNQ14191 1432 aaPredicted RBP eCLIP13.54□□□□□ -0.24
SNRK-206ENST00000468628 HRCP23327 699 aa13.49□□□□□ -0.25
SNRK-206ENST00000468628 MSH5O43196 834 aa13.46□□□□□ -0.25
SNRK-206ENST00000468628 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.25
SNRK-206ENST00000468628 TNIKQ9UKE5 1360 aa13.44□□□□□ -0.26
SNRK-206ENST00000468628 GOLGA3Q08378 1498 aa13.42□□□□□ -0.26
SNRK-206ENST00000468628 CFTRP13569 1480 aa13.42□□□□□ -0.26
SNRK-206ENST00000468628 SOGA1O94964 1423 aa13.41□□□□□ -0.26
SNRK-206ENST00000468628 PCGF6Q9BYE7 350 aa13.4□□□□□ -0.26
SNRK-206ENST00000468628 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
SNRK-206ENST00000468628 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
SNRK-206ENST00000468628 RUSC2Q8N2Y8 1516 aa13.35□□□□□ -0.27
SNRK-206ENST00000468628 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
SNRK-206ENST00000468628 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
SNRK-206ENST00000468628 CC2D2AQ9P2K1 1620 aa13.33□□□□□ -0.28
SNRK-206ENST00000468628 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
SNRK-206ENST00000468628 CUX1P39880 1505 aa13.32□□□□□ -0.28
SNRK-206ENST00000468628 PRXQ9BXM0 1461 aa13.24□□□□□ -0.29
SNRK-206ENST00000468628 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
SNRK-206ENST00000468628 ZEB1P37275 1124 aaPredicted RBP13.19□□□□□ -0.3
SNRK-206ENST00000468628 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
SNRK-206ENST00000468628 LAMC3Q9Y6N6 1575 aa13.17□□□□□ -0.3
SNRK-206ENST00000468628 KIF27Q86VH2 1401 aa13.16□□□□□ -0.3
SNRK-206ENST00000468628 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
SNRK-206ENST00000468628 VPS8Q8N3P4 1428 aa13.15□□□□□ -0.3
SNRK-206ENST00000468628 WDR97A6NE52 1622 aa13.15□□□□□ -0.3
SNRK-206ENST00000468628 CLIP1P30622 1438 aa13.14□□□□□ -0.31
SNRK-206ENST00000468628 CUL7Q14999 1698 aa13.08□□□□□ -0.31
SNRK-206ENST00000468628 FGD5Q6ZNL6 1462 aa13.07□□□□□ -0.32
SNRK-206ENST00000468628 FANCD2Q9BXW9 1451 aa13.07□□□□□ -0.32
SNRK-206ENST00000468628 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
SNRK-206ENST00000468628 ABCA10Q8WWZ4 1543 aa13.05□□□□□ -0.32
SNRK-206ENST00000468628 CTTNBP2Q8WZ74 1663 aa13.05□□□□□ -0.32
SNRK-206ENST00000468628 ARAP1Q96P48 1450 aa13.04□□□□□ -0.32
SNRK-206ENST00000468628 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
SNRK-206ENST00000468628 MAP3K1Q13233 1512 aa13.02□□□□□ -0.33
SNRK-206ENST00000468628 CUX2O14529 1486 aa13□□□□□ -0.33
SNRK-206ENST00000468628 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
SNRK-206ENST00000468628 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
SNRK-206ENST00000468628 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
SNRK-206ENST00000468628 POLA1P09884 1462 aaPredicted RBP12.97□□□□□ -0.33
SNRK-206ENST00000468628 IGF1RP08069 1367 aa12.96□□□□□ -0.33
SNRK-206ENST00000468628 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.33
SNRK-206ENST00000468628 ARHGAP35Q9NRY4 1499 aa12.96□□□□□ -0.34
SNRK-206ENST00000468628 EFCAB5A4FU69 1503 aa12.94□□□□□ -0.34
SNRK-206ENST00000468628 URB2Q14146 1524 aaKnown RBP12.92□□□□□ -0.34
SNRK-206ENST00000468628 NESP48681 1621 aa12.91□□□□□ -0.34
SNRK-206ENST00000468628 PPARGC1BQ86YN6 1023 aaKnown RBP12.91□□□□□ -0.34
SNRK-206ENST00000468628 PDS5BQ9NTI5 1447 aa12.9□□□□□ -0.34
SNRK-206ENST00000468628 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
SNRK-206ENST00000468628 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
SNRK-206ENST00000468628 CARMIL1Q5VZK9 1371 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms