RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 NISCHQ9Y2I1 1504 aa49.91■■■■■ 5.58
TRIM41-208ENST00000515499 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
TRIM41-208ENST00000515499 ABCC9O60706 1549 aa42.92■■■■■ 4.46
TRIM41-208ENST00000515499 ZCCHC6Q5VYS8 1495 aaKnown RBP41.63■■■■■ 4.25
TRIM41-208ENST00000515499 DCAF8L2P0C7V8 631 aa41.57■■■■■ 4.25
TRIM41-208ENST00000515499 NACADO15069 1562 aa41.5■■■■■ 4.23
TRIM41-208ENST00000515499 RB1CC1Q8TDY2 1594 aa41.46■■■■■ 4.23
TRIM41-208ENST00000515499 MYO15BQ96JP2 1530 aa41.39■■■■■ 4.22
TRIM41-208ENST00000515499 DCAF1Q9Y4B6 1507 aa41.34■■■■■ 4.21
TRIM41-208ENST00000515499 UNC13AQ9UPW8 1703 aa40.48■■■■■ 4.07
TRIM41-208ENST00000515499 SCRIBQ14160 1630 aa40.34■■■■■ 4.05
TRIM41-208ENST00000515499 PABPN1Q86U42 306 aaKnown RBP eCLIP40.18■■■■■ 4.02
TRIM41-208ENST00000515499 BICRAQ9NZM4 1560 aa40.17■■■■■ 4.02
TRIM41-208ENST00000515499 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
TRIM41-208ENST00000515499 DNAJC5BQ9UF47 199 aa39.1■■■■□ 3.85
TRIM41-208ENST00000515499 EIF4G1Q04637 1599 aaKnown RBP39.08■■■■□ 3.85
TRIM41-208ENST00000515499 CC2D2AQ9P2K1 1620 aa38.84■■■■□ 3.81
TRIM41-208ENST00000515499 CECR2Q9BXF3 1484 aa38.83■■■■□ 3.81
TRIM41-208ENST00000515499 BAZ1AQ9NRL2 1556 aaPredicted RBP38.66■■■■□ 3.78
TRIM41-208ENST00000515499 SMARCA4P51532 1647 aa38.63■■■■□ 3.77
TRIM41-208ENST00000515499 MROH2BQ7Z745 1585 aa38.45■■■■□ 3.75
TRIM41-208ENST00000515499 ATAD2BQ9ULI0 1458 aa38.36■■■■□ 3.73
TRIM41-208ENST00000515499 SMARCA2P51531 1590 aa38.33■■■■□ 3.73
TRIM41-208ENST00000515499 NCAPD3P42695 1498 aa38.3■■■■□ 3.72
TRIM41-208ENST00000515499 PEG3Q9GZU2 1588 aa38.27■■■■□ 3.72
TRIM41-208ENST00000515499 RSF1Q96T23 1441 aaPredicted RBP38.16■■■■□ 3.7
TRIM41-208ENST00000515499 HMGXB3Q12766 1538 aa38.12■■■■□ 3.69
TRIM41-208ENST00000515499 BAZ1BQ9UIG0 1483 aaKnown RBP38.05■■■■□ 3.68
TRIM41-208ENST00000515499 WIZO95785 1651 aa38.04■■■■□ 3.68
TRIM41-208ENST00000515499 TOP2AP11388 1531 aaKnown RBP37.68■■■■□ 3.62
TRIM41-208ENST00000515499 SUPT5HO00267 1087 aaKnown RBP37.45■■■■□ 3.59
TRIM41-208ENST00000515499 CCDC88BA6NC98 1476 aa37.26■■■■□ 3.55
TRIM41-208ENST00000515499 NESP48681 1621 aa37.23■■■■□ 3.55
TRIM41-208ENST00000515499 LAMC3Q9Y6N6 1575 aa37.22■■■■□ 3.55
TRIM41-208ENST00000515499 CADPSQ9ULU8 1353 aa37.21■■■■□ 3.55
TRIM41-208ENST00000515499 CFTRP13569 1480 aa37.05■■■■□ 3.52
TRIM41-208ENST00000515499 PDS5BQ9NTI5 1447 aa36.98■■■■□ 3.51
TRIM41-208ENST00000515499 ERCC6Q03468 1493 aa36.97■■■■□ 3.51
TRIM41-208ENST00000515499 KIF21AQ7Z4S6 1674 aa36.79■■■■□ 3.48
TRIM41-208ENST00000515499 PRDM2Q13029 1718 aa36.76■■■■□ 3.47
TRIM41-208ENST00000515499 FANCD2Q9BXW9 1451 aa36.75■■■■□ 3.47
TRIM41-208ENST00000515499 CEP164Q9UPV0 1460 aa36.68■■■■□ 3.46
TRIM41-208ENST00000515499 THOC2Q8NI27 1593 aaKnown RBP36.58■■■■□ 3.45
TRIM41-208ENST00000515499 MRC2Q9UBG0 1479 aa36.55■■■■□ 3.44
TRIM41-208ENST00000515499 CUX2O14529 1486 aa36.47■■■■□ 3.43
TRIM41-208ENST00000515499 WDR62O43379 1518 aa36.41■■■■□ 3.42
TRIM41-208ENST00000515499 URB2Q14146 1524 aaKnown RBP36.36■■■■□ 3.41
TRIM41-208ENST00000515499 ABCC8Q09428 1581 aa36.27■■■■□ 3.4
TRIM41-208ENST00000515499 TOPBP1Q92547 1522 aa36.21■■■■□ 3.39
TRIM41-208ENST00000515499 DNMBPQ6XZF7 1577 aa36.19■■■■□ 3.38
TRIM41-208ENST00000515499 CUX1P39880 1505 aa36.05■■■■□ 3.36
TRIM41-208ENST00000515499 WRNQ14191 1432 aaPredicted RBP eCLIP35.97■■■■□ 3.354e-9■■□□□ 14.1
TRIM41-208ENST00000515499 POLA1P09884 1462 aaPredicted RBP35.92■■■■□ 3.34
TRIM41-208ENST00000515499 IFT140Q96RY7 1462 aa35.91■■■■□ 3.34
TRIM41-208ENST00000515499 FGD5Q6ZNL6 1462 aa35.87■■■■□ 3.33
TRIM41-208ENST00000515499 TOP2BQ02880 1626 aa35.84■■■■□ 3.33
TRIM41-208ENST00000515499 SYNJ1O43426 1573 aa35.83■■■■□ 3.33
TRIM41-208ENST00000515499 BIVM-ERCC5R4GMW8 1640 aa35.83■■■■□ 3.33
TRIM41-208ENST00000515499 SOGA1O94964 1423 aa35.81■■■■□ 3.32
TRIM41-208ENST00000515499 TARBP1Q13395 1621 aaKnown RBP35.78■■■■□ 3.32
TRIM41-208ENST00000515499 RAD54L2Q9Y4B4 1467 aa35.75■■■■□ 3.31
TRIM41-208ENST00000515499 ZNF608Q9ULD9 1512 aaPredicted RBP35.69■■■■□ 3.3
TRIM41-208ENST00000515499 ABCA10Q8WWZ4 1543 aa35.57■■■■□ 3.28
TRIM41-208ENST00000515499 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
TRIM41-208ENST00000515499 EIF4G3O43432 1585 aaKnown RBP35.55■■■■□ 3.28
TRIM41-208ENST00000515499 AQRO60306 1485 aaKnown RBP eCLIP35.54■■■■□ 3.285e-7■■■■□ 26.3
TRIM41-208ENST00000515499 WDR97A6NE52 1622 aa35.54■■■■□ 3.28
TRIM41-208ENST00000515499 TRIM41Q8WV44 630 aa35.39■■■■□ 3.26
TRIM41-208ENST00000515499 GAPVD1Q14C86 1478 aa35.38■■■■□ 3.25
TRIM41-208ENST00000515499 ABCA5Q8WWZ7 1642 aa35.37■■■■□ 3.25
TRIM41-208ENST00000515499 GRIN2BQ13224 1484 aa35.34■■■■□ 3.25
TRIM41-208ENST00000515499 PBRM1Q86U86 1689 aa35.25■■■■□ 3.23
TRIM41-208ENST00000515499 SNAPC4Q5SXM2 1469 aa35.22■■■■□ 3.23
TRIM41-208ENST00000515499 MAGI1Q96QZ7 1491 aaPredicted RBP35.21■■■■□ 3.23
TRIM41-208ENST00000515499 KIF27Q86VH2 1401 aa35.2■■■■□ 3.23
TRIM41-208ENST00000515499 CHIC1Q5VXU3 224 aa35.18■■■■□ 3.22
TRIM41-208ENST00000515499 ERICH3Q5RHP9 1530 aa35.15■■■■□ 3.22
TRIM41-208ENST00000515499 FBLN2P98095 1184 aa35.07■■■■□ 3.2
TRIM41-208ENST00000515499 SYNJ2O15056 1496 aa35.06■■■■□ 3.2
TRIM41-208ENST00000515499 OSCARQ8IYS5 282 aa35.06■■■■□ 3.2
TRIM41-208ENST00000515499 CHMP7Q8WUX9 453 aaPredicted RBP35.05■■■■□ 3.2
TRIM41-208ENST00000515499 IGF1RP08069 1367 aa35.03■■■■□ 3.2
TRIM41-208ENST00000515499 CHD1O14646 1710 aa35.03■■■■□ 3.2
TRIM41-208ENST00000515499 FHAD1B1AJZ9 1412 aa35■■■■□ 3.19
TRIM41-208ENST00000515499 ADAMTS12P58397 1594 aa35■■■■□ 3.19
TRIM41-208ENST00000515499 DNAJC5Q9H3Z4 198 aa34.98■■■■□ 3.19
TRIM41-208ENST00000515499 RUSC2Q8N2Y8 1516 aa34.96■■■■□ 3.19
TRIM41-208ENST00000515499 CUL7Q14999 1698 aa34.89■■■■□ 3.18
TRIM41-208ENST00000515499 GRIN2AQ12879 1464 aa34.86■■■■□ 3.17
TRIM41-208ENST00000515499 CARMIL1Q5VZK9 1371 aa34.83■■■■□ 3.17
TRIM41-208ENST00000515499 EEA1Q15075 1411 aa34.78■■■■□ 3.16
TRIM41-208ENST00000515499 NUP160Q12769 1436 aa34.71■■■■□ 3.15
TRIM41-208ENST00000515499 CSRNP3Q8WYN3 585 aa34.69■■■■□ 3.14
TRIM41-208ENST00000515499 CLASP1Q7Z460 1538 aa34.68■■■■□ 3.14
TRIM41-208ENST00000515499 CEP170Q5SW79 1584 aa34.66■■■■□ 3.14
TRIM41-208ENST00000515499 RAPGEF2Q9Y4G8 1499 aa34.65■■■■□ 3.14
TRIM41-208ENST00000515499 PRXQ9BXM0 1461 aa34.61■■■■□ 3.13
TRIM41-208ENST00000515499 FAM9AQ8IZU1 332 aaPredicted RBP34.6■■■■□ 3.13
TRIM41-208ENST00000515499 KIAA0586Q9BVV6 1533 aa34.48■■■■□ 3.11
TRIM41-208ENST00000515499 ARHGEF11O15085 1522 aa34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms