RNA–Protein interactions for RNA: ENST00000512382.1

FAM20C-204, Transcript of FAM20C, golgi associated secretory pathway kinase, humanhuman

TSL 2

Gene FAM20C, Length 1,018 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20C-204ENST00000512382 NISCHQ9Y2I1 1504 aa35.5■■■■□ 3.27
FAM20C-204ENST00000512382 ABCC9O60706 1549 aa31.91■■■□□ 2.7
FAM20C-204ENST00000512382 CCDC180Q9P1Z9 1646 aa31.51■■■□□ 2.63
FAM20C-204ENST00000512382 DNAJC5BQ9UF47 199 aa30.75■■■□□ 2.51
FAM20C-204ENST00000512382 RB1CC1Q8TDY2 1594 aa30.02■■■□□ 2.4
FAM20C-204ENST00000512382 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
FAM20C-204ENST00000512382 NACADO15069 1562 aa29.78■■■□□ 2.36
FAM20C-204ENST00000512382 PABPN1Q86U42 306 aaKnown RBP eCLIP29.66■■■□□ 2.34
FAM20C-204ENST00000512382 MYO15BQ96JP2 1530 aa29.52■■■□□ 2.32
FAM20C-204ENST00000512382 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
FAM20C-204ENST00000512382 UNC13AQ9UPW8 1703 aa29.4■■■□□ 2.3
FAM20C-204ENST00000512382 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
FAM20C-204ENST00000512382 BICRAQ9NZM4 1560 aa29.25■■■□□ 2.27
FAM20C-204ENST00000512382 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
FAM20C-204ENST00000512382 CECR2Q9BXF3 1484 aa28.82■■■□□ 2.2
FAM20C-204ENST00000512382 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.19
FAM20C-204ENST00000512382 SHROOM4Q9ULL8 1493 aa28.68■■■□□ 2.18
FAM20C-204ENST00000512382 DNAJC5Q9H3Z4 198 aa28.67■■■□□ 2.18
FAM20C-204ENST00000512382 EIF4G1Q04637 1599 aaKnown RBP28.53■■■□□ 2.16
FAM20C-204ENST00000512382 CUX2O14529 1486 aa27.76■■■□□ 2.03
FAM20C-204ENST00000512382 ERCC6Q03468 1493 aa27.56■■■□□ 2
FAM20C-204ENST00000512382 NCAPD3P42695 1498 aa27.55■■■□□ 2
FAM20C-204ENST00000512382 SMARCA4P51532 1647 aa27.53■■■□□ 2
FAM20C-204ENST00000512382 ATAD2BQ9ULI0 1458 aa27.53■■■□□ 2
FAM20C-204ENST00000512382 BAZ1AQ9NRL2 1556 aaPredicted RBP27.49■■□□□ 1.99
FAM20C-204ENST00000512382 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
FAM20C-204ENST00000512382 MROH2BQ7Z745 1585 aa27.37■■□□□ 1.97
FAM20C-204ENST00000512382 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
FAM20C-204ENST00000512382 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
FAM20C-204ENST00000512382 NESP48681 1621 aa27.26■■□□□ 1.95
FAM20C-204ENST00000512382 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
FAM20C-204ENST00000512382 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
FAM20C-204ENST00000512382 TRIM41Q8WV44 630 aa27.04■■□□□ 1.92
FAM20C-204ENST00000512382 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
FAM20C-204ENST00000512382 WIZO95785 1651 aa27■■□□□ 1.91
FAM20C-204ENST00000512382 LAMC3Q9Y6N6 1575 aa26.86■■□□□ 1.89
FAM20C-204ENST00000512382 KIF21AQ7Z4S6 1674 aa26.82■■□□□ 1.88
FAM20C-204ENST00000512382 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
FAM20C-204ENST00000512382 PDS5BQ9NTI5 1447 aa26.76■■□□□ 1.87
FAM20C-204ENST00000512382 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
FAM20C-204ENST00000512382 MRC2Q9UBG0 1479 aa26.58■■□□□ 1.85
FAM20C-204ENST00000512382 WDR62O43379 1518 aa26.53■■□□□ 1.84
FAM20C-204ENST00000512382 CFTRP13569 1480 aa26.52■■□□□ 1.84
FAM20C-204ENST00000512382 CCDC88BA6NC98 1476 aa26.48■■□□□ 1.83
FAM20C-204ENST00000512382 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
FAM20C-204ENST00000512382 OSCARQ8IYS5 282 aa26.41■■□□□ 1.82
FAM20C-204ENST00000512382 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
FAM20C-204ENST00000512382 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
FAM20C-204ENST00000512382 URB2Q14146 1524 aaKnown RBP26.16■■□□□ 1.78
FAM20C-204ENST00000512382 RIMBP3CA6NJZ7 1639 aa26.1■■□□□ 1.77
FAM20C-204ENST00000512382 RIMBP3BA6NNM3 1639 aa26.1■■□□□ 1.77
FAM20C-204ENST00000512382 RIMBP3Q9UFD9 1639 aa26.1■■□□□ 1.77
FAM20C-204ENST00000512382 PRDM2Q13029 1718 aa26.05■■□□□ 1.76
FAM20C-204ENST00000512382 ARHGEF11O15085 1522 aa25.98■■□□□ 1.75
FAM20C-204ENST00000512382 TOPBP1Q92547 1522 aa25.96■■□□□ 1.75
FAM20C-204ENST00000512382 ABCC8Q09428 1581 aa25.94■■□□□ 1.74
FAM20C-204ENST00000512382 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
FAM20C-204ENST00000512382 DNMBPQ6XZF7 1577 aa25.86■■□□□ 1.73
FAM20C-204ENST00000512382 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
FAM20C-204ENST00000512382 CYB5RLQ6IPT4 315 aa25.86■■□□□ 1.73
FAM20C-204ENST00000512382 TRHP20396 242 aaPredicted RBP25.74■■□□□ 1.71
FAM20C-204ENST00000512382 POLA1P09884 1462 aaPredicted RBP25.73■■□□□ 1.71
FAM20C-204ENST00000512382 EIF4G3O43432 1585 aaKnown RBP25.72■■□□□ 1.71
FAM20C-204ENST00000512382 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
FAM20C-204ENST00000512382 SOGA1O94964 1423 aa25.69■■□□□ 1.7
FAM20C-204ENST00000512382 CUX1P39880 1505 aa25.68■■□□□ 1.7
FAM20C-204ENST00000512382 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
FAM20C-204ENST00000512382 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.72e-6■■■■□ 22.9
FAM20C-204ENST00000512382 FGD5Q6ZNL6 1462 aa25.64■■□□□ 1.69
FAM20C-204ENST00000512382 TARBP1Q13395 1621 aaKnown RBP25.63■■□□□ 1.69
FAM20C-204ENST00000512382 TDRD9Q8NDG6 1382 aaKnown RBP25.6■■□□□ 1.69
FAM20C-204ENST00000512382 CHD1O14646 1710 aa25.6■■□□□ 1.69
FAM20C-204ENST00000512382 FBLN2P98095 1184 aa25.59■■□□□ 1.69
FAM20C-204ENST00000512382 AEBP2Q6ZN18 517 aaPredicted RBP25.47■■□□□ 1.67
FAM20C-204ENST00000512382 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
FAM20C-204ENST00000512382 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
FAM20C-204ENST00000512382 ABCA10Q8WWZ4 1543 aa25.37■■□□□ 1.65
FAM20C-204ENST00000512382 GRIN2BQ13224 1484 aa25.36■■□□□ 1.65
FAM20C-204ENST00000512382 SNAPC4Q5SXM2 1469 aa25.35■■□□□ 1.65
FAM20C-204ENST00000512382 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
FAM20C-204ENST00000512382 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
FAM20C-204ENST00000512382 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
FAM20C-204ENST00000512382 GAPVD1Q14C86 1478 aa25.34■■□□□ 1.65
FAM20C-204ENST00000512382 CLASP1Q7Z460 1538 aa25.32■■□□□ 1.64
FAM20C-204ENST00000512382 MAGI1Q96QZ7 1491 aaPredicted RBP25.29■■□□□ 1.64
FAM20C-204ENST00000512382 BIVM-ERCC5R4GMW8 1640 aa25.29■■□□□ 1.64
FAM20C-204ENST00000512382 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
FAM20C-204ENST00000512382 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
FAM20C-204ENST00000512382 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
FAM20C-204ENST00000512382 FHAD1B1AJZ9 1412 aa25.05■■□□□ 1.6
FAM20C-204ENST00000512382 ERICH3Q5RHP9 1530 aa25.03■■□□□ 1.6
FAM20C-204ENST00000512382 GRIN2AQ12879 1464 aa25.02■■□□□ 1.6
FAM20C-204ENST00000512382 ADAMTS12P58397 1594 aa25■■□□□ 1.59
FAM20C-204ENST00000512382 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
FAM20C-204ENST00000512382 IGF1RP08069 1367 aa24.94■■□□□ 1.58
FAM20C-204ENST00000512382 ERCC6L2Q5T890 1561 aa24.93■■□□□ 1.58
FAM20C-204ENST00000512382 NUP160Q12769 1436 aa24.93■■□□□ 1.58
FAM20C-204ENST00000512382 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
FAM20C-204ENST00000512382 JPH4Q96JJ6 628 aa24.79■■□□□ 1.56
FAM20C-204ENST00000512382 CARMIL1Q5VZK9 1371 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms