Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.4■□□□□ 0.22
GFI1Q99684 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GFI1Q99684 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.4■□□□□ 0.22
GFI1Q99684 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
GFI1Q99684 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
GFI1Q99684 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GFI1Q99684 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.4■□□□□ 0.22
GFI1Q99684 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.4■□□□□ 0.22
GFI1Q99684 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 AL121906.2-201ENST00000621597 723 ntBASIC16.4■□□□□ 0.22
GFI1Q99684 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
GFI1Q99684 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GFI1Q99684 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.4■□□□□ 0.22
GFI1Q99684 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GFI1Q99684 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
GFI1Q99684 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
GFI1Q99684 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GFI1Q99684 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
GFI1Q99684 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
GFI1Q99684 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
GFI1Q99684 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.39■□□□□ 0.21
GFI1Q99684 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.39■□□□□ 0.21
GFI1Q99684 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.39■□□□□ 0.21
GFI1Q99684 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.39■□□□□ 0.21
GFI1Q99684 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
GFI1Q99684 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GFI1Q99684 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.39■□□□□ 0.21
GFI1Q99684 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GFI1Q99684 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.38■□□□□ 0.21
GFI1Q99684 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.38■□□□□ 0.21
GFI1Q99684 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.38■□□□□ 0.21
GFI1Q99684 TUBB8P6-201ENST00000436895 1288 ntBASIC16.38■□□□□ 0.21
GFI1Q99684 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.38■□□□□ 0.21
GFI1Q99684 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.38■□□□□ 0.21
GFI1Q99684 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.38■□□□□ 0.21
GFI1Q99684 AC020763.4-201ENST00000623414 4170 ntBASIC16.38■□□□□ 0.21
GFI1Q99684 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.38■□□□□ 0.21
GFI1Q99684 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GFI1Q99684 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GFI1Q99684 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
GFI1Q99684 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.37■□□□□ 0.21
GFI1Q99684 TSPY23P-201ENST00000440136 739 ntBASIC16.37■□□□□ 0.21
GFI1Q99684 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.37■□□□□ 0.21
GFI1Q99684 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.37■□□□□ 0.21
GFI1Q99684 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.37■□□□□ 0.21
GFI1Q99684 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.37■□□□□ 0.21
GFI1Q99684 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GFI1Q99684 AC105036.2-201ENST00000569468 176 ntBASIC16.37■□□□□ 0.21
GFI1Q99684 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.37■□□□□ 0.21
GFI1Q99684 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms