Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP6Q96FZ7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 LINC00896-202ENST00000609602 2128 ntBASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHMP6Q96FZ7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 AC073592.3-201ENST00000625118 1834 ntBASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 KRT18P5-201ENST00000436075 1291 ntBASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 AC106820.2-201ENST00000563775 3264 ntBASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.12■□□□□ 0.65
CHMP6Q96FZ7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHMP6Q96FZ7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 KRT18P11-201ENST00000435214 1283 ntBASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.1■□□□□ 0.65
CHMP6Q96FZ7 MIR5787-201ENST00000611784 55 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms