Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 BCL2-203ENST00000589955 5011 ntBASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.26■□□□□ 0.19
SMIM4Q8WVI0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 RARRES2P4-201ENST00000514074 484 ntBASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMIM4Q8WVI0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 KRT19P1-201ENST00000405746 1186 ntBASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 SLC25A6P5-201ENST00000435663 894 ntBASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 HTR7P1-202ENST00000624664 4411 ntBASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMIM4Q8WVI0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 AC123595.1-201ENST00000440769 1046 ntBASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 C2orf69P4-201ENST00000565394 541 ntBASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SMIM4Q8WVI0 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SMIM4Q8WVI0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms