Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH11P55287 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH11P55287 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH11P55287 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDH11P55287 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDH11P55287 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH11P55287 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH11P55287 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CDH11P55287 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH11P55287 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH11P55287 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.4■□□□□ 0.38
CDH11P55287 AC008550.1-201ENST00000511500 884 ntBASIC17.4■□□□□ 0.38
CDH11P55287 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH11P55287 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.4■□□□□ 0.38
CDH11P55287 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH11P55287 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH11P55287 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.4■□□□□ 0.38
CDH11P55287 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.39■□□□□ 0.38
CDH11P55287 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.38
CDH11P55287 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH11P55287 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CDH11P55287 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH11P55287 AC079598.2-202ENST00000546624 1451 ntBASIC17.39■□□□□ 0.37
CDH11P55287 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CDH11P55287 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH11P55287 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH11P55287 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH11P55287 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH11P55287 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH11P55287 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CDH11P55287 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.39■□□□□ 0.37
CDH11P55287 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.39■□□□□ 0.37
CDH11P55287 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDH11P55287 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDH11P55287 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDH11P55287 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH11P55287 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CDH11P55287 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH11P55287 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH11P55287 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.38■□□□□ 0.37
CDH11P55287 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH11P55287 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDH11P55287 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms