Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 AL049812.1-201ENST00000432563 2267 ntBASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
UBQLN4Q9NRR5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBQLN4Q9NRR5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBQLN4Q9NRR5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
UBQLN4Q9NRR5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBQLN4Q9NRR5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
UBQLN4Q9NRR5 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.52■□□□□ 0.39
UBQLN4Q9NRR5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 MESTP1-201ENST00000404287 994 ntBASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 AC008040.2-201ENST00000461049 708 ntBASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 AP000692.2-201ENST00000608391 879 ntBASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
UBQLN4Q9NRR5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 DGCR10-201ENST00000609839 495 ntBASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 AC026471.5-201ENST00000615068 467 ntBASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UBQLN4Q9NRR5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 AC098818.2-201ENST00000564925 2320 ntBASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 AC087289.5-201ENST00000586076 3175 ntBASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBQLN4Q9NRR5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms