Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC6.95□□□□□ -1.33e-17■■□□□ 13.2
LARP4Q71RC2 RPL36A-201ENST00000372849 433 ntTSL 56.83□□□□□ -1.323e-17■■□□□ 13.2
LARP4Q71RC2 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.523e-17■■□□□ 13.2
LARP4Q71RC2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.37□□□□□ -1.553e-17■■□□□ 13.2
LARP4Q71RC2 TTR-205ENST00000613781 556 ntTSL 5 BASIC7.82□□□□□ -1.161e-10■■□□□ 13.2
LARP4Q71RC2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.9■□□□□ 0.622e-7■■□□□ 13.2
LARP4Q71RC2 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.62e-7■■□□□ 13.2
LARP4Q71RC2 GOLGA4-201ENST00000356847 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.662e-7■■□□□ 13.2
LARP4Q71RC2 GOLGA4-207ENST00000437131 6947 ntTSL 1 (best)2.11□□□□□ -2.072e-7■■□□□ 13.2
LARP4Q71RC2 SNHG5-208ENST00000433843 388 ntTSL 22.99□□□□□ -1.932e-10■■□□□ 13.2
LARP4Q71RC2 ASPHD1-205ENST00000566693 1732 ntTSL 1 (best)23.62■■□□□ 1.373e-6■■□□□ 13.2
LARP4Q71RC2 ASPHD1-202ENST00000414952 1451 ntTSL 222.38■■□□□ 1.173e-6■■□□□ 13.2
LARP4Q71RC2 MRPL28-205ENST00000447696 722 ntTSL 321.91■■□□□ 1.12e-6■■□□□ 13.2
LARP4Q71RC2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.092e-6■■□□□ 13.2
LARP4Q71RC2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.46■■□□□ 1.032e-6■■□□□ 13.2
LARP4Q71RC2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.792e-6■■□□□ 13.2
LARP4Q71RC2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.662e-6■■□□□ 13.2
LARP4Q71RC2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.633e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-203ENST00000518174 1981 ntTSL 518.36■□□□□ 0.532e-6■■□□□ 13.2
LARP4Q71RC2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.12■□□□□ 0.492e-6■■□□□ 13.2
LARP4Q71RC2 CSK-205ENST00000563894 1036 ntTSL 1 (best)17.99■□□□□ 0.472e-6■■□□□ 13.2
LARP4Q71RC2 RABAC1-203ENST00000596171 759 ntTSL 217.93■□□□□ 0.461e-8■■□□□ 13.2
LARP4Q71RC2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.443e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.68■□□□□ 0.422e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-206ENST00000520303 1803 ntTSL 1 (best)17.55■□□□□ 0.42e-6■■□□□ 13.2
LARP4Q71RC2 CSK-213ENST00000569462 534 ntTSL 417.28■□□□□ 0.362e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-214ENST00000534038 593 ntTSL 417.13■□□□□ 0.332e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-205ENST00000518340 582 ntTSL 316.88■□□□□ 0.292e-6■■□□□ 13.2
LARP4Q71RC2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.252e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.232e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-211ENST00000530010 556 ntTSL 216.39■□□□□ 0.212e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-210ENST00000529861 857 ntTSL 316.27■□□□□ 0.22e-6■■□□□ 13.2
LARP4Q71RC2 TMEM63B-209ENST00000533121 2465 ntTSL 1 (best)15.71■□□□□ 0.12e-6■■□□□ 13.2
LARP4Q71RC2 PTK7-220ENST00000497957 713 ntTSL 315.32■□□□□ 0.042e-6■■□□□ 13.2
LARP4Q71RC2 TMEM63B-203ENST00000371893 2921 ntTSL 1 (best)15.11■□□□□ 0.012e-6■■□□□ 13.2
LARP4Q71RC2 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.092e-6■■□□□ 13.2
LARP4Q71RC2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.162e-6■■□□□ 13.2
LARP4Q71RC2 BZW2-209ENST00000437745 1711 ntTSL 1 (best)13.75□□□□□ -0.212e-6■■□□□ 13.2
LARP4Q71RC2 CSK-208ENST00000567123 556 ntTSL 413.68□□□□□ -0.222e-6■■□□□ 13.2
LARP4Q71RC2 PTK7-218ENST00000493339 2987 ntTSL 213.18□□□□□ -0.32e-6■■□□□ 13.2
LARP4Q71RC2 GATB-202ENST00000503160 1860 ntTSL 512.93□□□□□ -0.342e-6■■□□□ 13.2
LARP4Q71RC2 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.432e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-208ENST00000521265 1741 ntTSL 512.16□□□□□ -0.462e-6■■□□□ 13.2
LARP4Q71RC2 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.492e-6■■□□□ 13.2
LARP4Q71RC2 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.492e-6■■□□□ 13.2
LARP4Q71RC2 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.542e-6■■□□□ 13.2
LARP4Q71RC2 HLA-B-251ENST00000463574 588 nt11.45□□□□□ -0.582e-6■■□□□ 13.2
LARP4Q71RC2 AKAP1-212ENST00000573326 1580 ntTSL 511.37□□□□□ -0.592e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-209ENST00000529612 574 ntTSL 411.18□□□□□ -0.622e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-207ENST00000528741 719 ntTSL 511.18□□□□□ -0.622e-6■■□□□ 13.2
LARP4Q71RC2 BZW2-214ENST00000630952 1721 ntTSL 5 BASIC11.16□□□□□ -0.622e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-208ENST00000529263 770 ntTSL 510.78□□□□□ -0.682e-6■■□□□ 13.2
LARP4Q71RC2 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.742e-6■■□□□ 13.2
LARP4Q71RC2 GATB-204ENST00000507592 749 ntTSL 310.23□□□□□ -0.772e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-217ENST00000534533 836 ntTSL 39.42□□□□□ -0.92e-6■■□□□ 13.2
LARP4Q71RC2 BZW2-207ENST00000433922 1862 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.912e-6■■□□□ 13.2
LARP4Q71RC2 BZW2-212ENST00000452975 1464 ntTSL 1 (best) BASIC9.39□□□□□ -0.912e-6■■□□□ 13.2
LARP4Q71RC2 BZW2-202ENST00000405202 1689 ntTSL 5 BASIC9.38□□□□□ -0.912e-6■■□□□ 13.2
LARP4Q71RC2 BZW2-201ENST00000258761 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.922e-6■■□□□ 13.2
LARP4Q71RC2 AC073861.1-201ENST00000496294 459 ntBASIC8.9□□□□□ -0.982e-6■■□□□ 13.2
LARP4Q71RC2 GATB-206ENST00000510396 3745 ntTSL 28.59□□□□□ -1.032e-6■■□□□ 13.2
LARP4Q71RC2 BZW2-208ENST00000436868 1784 ntTSL 58.45□□□□□ -1.062e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-205ENST00000528191 569 ntTSL 48.41□□□□□ -1.062e-6■■□□□ 13.2
LARP4Q71RC2 GATB-207ENST00000510720 874 ntTSL 38.41□□□□□ -1.062e-6■■□□□ 13.2
LARP4Q71RC2 GATB-212ENST00000515564 6552 ntTSL 28□□□□□ -1.132e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-204ENST00000518296 878 ntTSL 27.61□□□□□ -1.192e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-212ENST00000523127 735 ntTSL 56.21□□□□□ -1.422e-6■■□□□ 13.2
LARP4Q71RC2 SARAF-209ENST00000521934 543 ntTSL 25.12□□□□□ -1.592e-6■■□□□ 13.2
LARP4Q71RC2 CTSH-212ENST00000530929 479 ntTSL 34.66□□□□□ -1.662e-6■■□□□ 13.2
LARP4Q71RC2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.4■□□□□ 0.75e-24■■□□□ 13.2
LARP4Q71RC2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.164e-13■■□□□ 13.2
LARP4Q71RC2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.22■□□□□ 0.354e-13■■□□□ 13.2
LARP4Q71RC2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.86□□□□□ -0.194e-13■■□□□ 13.2
LARP4Q71RC2 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC12.85□□□□□ -0.354e-13■■□□□ 13.2
LARP4Q71RC2 PCK2-207ENST00000559171 508 ntTSL 312.39□□□□□ -0.434e-13■■□□□ 13.2
LARP4Q71RC2 RPS27A-205ENST00000463185 590 ntTSL 1 (best)18.86■□□□□ 0.611e-34■■□□□ 13.2
LARP4Q71RC2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.44■□□□□ 0.381e-34■■□□□ 13.2
LARP4Q71RC2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.021e-19■■□□□ 13.2
LARP4Q71RC2 RPS27A-202ENST00000402285 705 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.811e-19■■□□□ 13.2
LARP4Q71RC2 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.921e-19■■□□□ 13.2
LARP4Q71RC2 RPS27A-209ENST00000494756 535 ntTSL 29.28□□□□□ -0.921e-34■■□□□ 13.2
LARP4Q71RC2 RPS27A-207ENST00000471772 557 ntTSL 27.41□□□□□ -1.221e-34■■□□□ 13.2
LARP4Q71RC2 RPS27A-204ENST00000449323 422 ntTSL 35.25□□□□□ -1.571e-19■■□□□ 13.2
LARP4Q71RC2 RPS27A-208ENST00000478196 580 ntTSL 25.22□□□□□ -1.571e-19■■□□□ 13.2
LARP4Q71RC2 RPL18-202ENST00000546623 541 ntTSL 514.5□□□□□ -0.094e-12■■□□□ 13.2
LARP4Q71RC2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.07■■□□□ 1.126e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.05■■□□□ 1.126e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.45■■□□□ 1.026e-7■■□□□ 13.2
LARP4Q71RC2 AC037459.1-201ENST00000450780 977 ntTSL 521.12■□□□□ 0.976e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.616e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.81■□□□□ 0.66e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.586e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.536e-7■■□□□ 13.2
LARP4Q71RC2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.336e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.45■□□□□ 0.226e-7■■□□□ 13.2
LARP4Q71RC2 AC037459.1-203ENST00000447849 794 ntTSL 515.98■□□□□ 0.156e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-220ENST00000622226 6559 nt14.34□□□□□ -0.116e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.91□□□□□ -0.186e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-213ENST00000448520 894 ntTSL 312.76□□□□□ -0.376e-7■■□□□ 13.2
LARP4Q71RC2 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC11.91□□□□□ -0.56e-7■■□□□ 13.2
Retrieved 100 of 15,922 protein–RNA pairs in 493.1 ms