RNA–Protein interactions for RNA: ENST00000510720.1

GATB-207, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 3

Gene GATB, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-207ENST00000510720 NISCHQ9Y2I1 1504 aa23.92■■□□□ 1.42
GATB-207ENST00000510720 ABCC9O60706 1549 aa22.01■■□□□ 1.11
GATB-207ENST00000510720 CCDC180Q9P1Z9 1646 aa21.66■■□□□ 1.06
GATB-207ENST00000510720 DNAJC5BQ9UF47 199 aa21.09■□□□□ 0.97
GATB-207ENST00000510720 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
GATB-207ENST00000510720 NACADO15069 1562 aa20.57■□□□□ 0.88
GATB-207ENST00000510720 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
GATB-207ENST00000510720 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
GATB-207ENST00000510720 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
GATB-207ENST00000510720 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
GATB-207ENST00000510720 MYO15BQ96JP2 1530 aa20.2■□□□□ 0.82
GATB-207ENST00000510720 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
GATB-207ENST00000510720 CC2D2AQ9P2K1 1620 aa19.9■□□□□ 0.78
GATB-207ENST00000510720 CECR2Q9BXF3 1484 aa19.89■□□□□ 0.77
GATB-207ENST00000510720 DCAF1Q9Y4B6 1507 aa19.77■□□□□ 0.76
GATB-207ENST00000510720 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
GATB-207ENST00000510720 ZCCHC6Q5VYS8 1495 aaKnown RBP19.74■□□□□ 0.75
GATB-207ENST00000510720 DNAJC5Q9H3Z4 198 aa19.73■□□□□ 0.75
GATB-207ENST00000510720 SCRIBQ14160 1630 aa19.64■□□□□ 0.73
GATB-207ENST00000510720 CUX2O14529 1486 aa19.19■□□□□ 0.66
GATB-207ENST00000510720 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
GATB-207ENST00000510720 ERCC6Q03468 1493 aa19.01■□□□□ 0.63
GATB-207ENST00000510720 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
GATB-207ENST00000510720 HMGXB3Q12766 1538 aa18.82■□□□□ 0.6
GATB-207ENST00000510720 NESP48681 1621 aa18.81■□□□□ 0.6
GATB-207ENST00000510720 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
GATB-207ENST00000510720 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
GATB-207ENST00000510720 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
GATB-207ENST00000510720 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
GATB-207ENST00000510720 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
GATB-207ENST00000510720 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
GATB-207ENST00000510720 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
GATB-207ENST00000510720 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
GATB-207ENST00000510720 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
GATB-207ENST00000510720 PDS5BQ9NTI5 1447 aa18.51■□□□□ 0.55
GATB-207ENST00000510720 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
GATB-207ENST00000510720 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
GATB-207ENST00000510720 MRC2Q9UBG0 1479 aa18.39■□□□□ 0.53
GATB-207ENST00000510720 WDR62O43379 1518 aa18.39■□□□□ 0.53
GATB-207ENST00000510720 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
GATB-207ENST00000510720 OSCARQ8IYS5 282 aa18.21■□□□□ 0.51
GATB-207ENST00000510720 WIZO95785 1651 aa18.16■□□□□ 0.5
GATB-207ENST00000510720 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
GATB-207ENST00000510720 CFTRP13569 1480 aa18.11■□□□□ 0.49
GATB-207ENST00000510720 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
GATB-207ENST00000510720 RIMBP3CA6NJZ7 1639 aa18.04■□□□□ 0.48
GATB-207ENST00000510720 RIMBP3BA6NNM3 1639 aa18.04■□□□□ 0.48
GATB-207ENST00000510720 RIMBP3Q9UFD9 1639 aa18.04■□□□□ 0.48
GATB-207ENST00000510720 ARHGEF11O15085 1522 aa17.94■□□□□ 0.46
GATB-207ENST00000510720 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
GATB-207ENST00000510720 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
GATB-207ENST00000510720 IFT140Q96RY7 1462 aa17.88■□□□□ 0.45
GATB-207ENST00000510720 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
GATB-207ENST00000510720 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
GATB-207ENST00000510720 CYB5RLQ6IPT4 315 aa17.79■□□□□ 0.44
GATB-207ENST00000510720 TOPBP1Q92547 1522 aa17.78■□□□□ 0.44
GATB-207ENST00000510720 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
GATB-207ENST00000510720 ARAP1Q96P48 1450 aa17.74■□□□□ 0.43
GATB-207ENST00000510720 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
GATB-207ENST00000510720 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
GATB-207ENST00000510720 CHD1O14646 1710 aa17.72■□□□□ 0.43
GATB-207ENST00000510720 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
GATB-207ENST00000510720 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
GATB-207ENST00000510720 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
GATB-207ENST00000510720 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
GATB-207ENST00000510720 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
GATB-207ENST00000510720 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
GATB-207ENST00000510720 FBLN2P98095 1184 aa17.56■□□□□ 0.4
GATB-207ENST00000510720 CLASP1Q7Z460 1538 aa17.54■□□□□ 0.4
GATB-207ENST00000510720 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
GATB-207ENST00000510720 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
GATB-207ENST00000510720 TDRD9Q8NDG6 1382 aaKnown RBP17.48■□□□□ 0.39
GATB-207ENST00000510720 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
GATB-207ENST00000510720 SOGA1O94964 1423 aa17.47■□□□□ 0.39
GATB-207ENST00000510720 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
GATB-207ENST00000510720 MAGI1Q96QZ7 1491 aaPredicted RBP17.43■□□□□ 0.38
GATB-207ENST00000510720 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
GATB-207ENST00000510720 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
GATB-207ENST00000510720 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
GATB-207ENST00000510720 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
GATB-207ENST00000510720 GAPVD1Q14C86 1478 aa17.35■□□□□ 0.37
GATB-207ENST00000510720 CUX1P39880 1505 aa17.32■□□□□ 0.36
GATB-207ENST00000510720 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
GATB-207ENST00000510720 ERCC6L2Q5T890 1561 aa17.21■□□□□ 0.35
GATB-207ENST00000510720 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
GATB-207ENST00000510720 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
GATB-207ENST00000510720 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
GATB-207ENST00000510720 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
GATB-207ENST00000510720 NUP160Q12769 1436 aa17.14■□□□□ 0.33
GATB-207ENST00000510720 SHROOM2Q13796 1616 aa17.13■□□□□ 0.33
GATB-207ENST00000510720 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
GATB-207ENST00000510720 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
GATB-207ENST00000510720 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
GATB-207ENST00000510720 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
GATB-207ENST00000510720 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
GATB-207ENST00000510720 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
GATB-207ENST00000510720 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.31
GATB-207ENST00000510720 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
GATB-207ENST00000510720 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
GATB-207ENST00000510720 MAPKBP1O60336 1514 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms