RNA–Protein interactions for RNA: ENST00000503160.5

GATB-202, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 5

Gene GATB, Length 1,860 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-202ENST00000503160 NISCHQ9Y2I1 1504 aa30.41■■■□□ 2.46
GATB-202ENST00000503160 CCDC180Q9P1Z9 1646 aa26.55■■□□□ 1.84
GATB-202ENST00000503160 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
GATB-202ENST00000503160 ABCC9O60706 1549 aa25.26■■□□□ 1.63
GATB-202ENST00000503160 DCAF8L2P0C7V8 631 aa25.21■■□□□ 1.63
GATB-202ENST00000503160 DCAF1Q9Y4B6 1507 aa25.11■■□□□ 1.61
GATB-202ENST00000503160 MYO15BQ96JP2 1530 aa24.85■■□□□ 1.57
GATB-202ENST00000503160 SHROOM4Q9ULL8 1493 aa24.79■■□□□ 1.56
GATB-202ENST00000503160 NACADO15069 1562 aa24.76■■□□□ 1.55
GATB-202ENST00000503160 RB1CC1Q8TDY2 1594 aa24.58■■□□□ 1.53
GATB-202ENST00000503160 SCRIBQ14160 1630 aa24.45■■□□□ 1.5
GATB-202ENST00000503160 UNC13AQ9UPW8 1703 aa24.11■■□□□ 1.45
GATB-202ENST00000503160 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
GATB-202ENST00000503160 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
GATB-202ENST00000503160 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
GATB-202ENST00000503160 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
GATB-202ENST00000503160 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
GATB-202ENST00000503160 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
GATB-202ENST00000503160 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
GATB-202ENST00000503160 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
GATB-202ENST00000503160 WIZO95785 1651 aa23.32■■□□□ 1.32
GATB-202ENST00000503160 EIF4G1Q04637 1599 aaKnown RBP23.15■■□□□ 1.3
GATB-202ENST00000503160 PEG3Q9GZU2 1588 aa23.1■■□□□ 1.29
GATB-202ENST00000503160 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
GATB-202ENST00000503160 TOP2AP11388 1531 aaKnown RBP23.05■■□□□ 1.28
GATB-202ENST00000503160 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
GATB-202ENST00000503160 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
GATB-202ENST00000503160 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
GATB-202ENST00000503160 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
GATB-202ENST00000503160 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
GATB-202ENST00000503160 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
GATB-202ENST00000503160 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
GATB-202ENST00000503160 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
GATB-202ENST00000503160 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
GATB-202ENST00000503160 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
GATB-202ENST00000503160 CFTRP13569 1480 aa22.32■■□□□ 1.16
GATB-202ENST00000503160 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
GATB-202ENST00000503160 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
GATB-202ENST00000503160 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
GATB-202ENST00000503160 NESP48681 1621 aa22.15■■□□□ 1.14
GATB-202ENST00000503160 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
GATB-202ENST00000503160 LAMC3Q9Y6N6 1575 aa22.1■■□□□ 1.13
GATB-202ENST00000503160 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
GATB-202ENST00000503160 TOP2BQ02880 1626 aa22■■□□□ 1.11
GATB-202ENST00000503160 CUX1P39880 1505 aa21.98■■□□□ 1.11
GATB-202ENST00000503160 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
GATB-202ENST00000503160 FAM9AQ8IZU1 332 aaPredicted RBP21.97■■□□□ 1.11
GATB-202ENST00000503160 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
GATB-202ENST00000503160 CEP164Q9UPV0 1460 aa21.91■■□□□ 1.1
GATB-202ENST00000503160 SOGA1O94964 1423 aa21.88■■□□□ 1.09
GATB-202ENST00000503160 KIF21AQ7Z4S6 1674 aa21.87■■□□□ 1.09
GATB-202ENST00000503160 LOC105371045A0A1W2PR82 267 aa21.84■■□□□ 1.09
GATB-202ENST00000503160 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
GATB-202ENST00000503160 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
GATB-202ENST00000503160 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
GATB-202ENST00000503160 EEA1Q15075 1411 aa21.77■■□□□ 1.08
GATB-202ENST00000503160 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.08
GATB-202ENST00000503160 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
GATB-202ENST00000503160 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
GATB-202ENST00000503160 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
GATB-202ENST00000503160 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
GATB-202ENST00000503160 ERCC6Q03468 1493 aa21.67■■□□□ 1.06
GATB-202ENST00000503160 MRC2Q9UBG0 1479 aa21.67■■□□□ 1.06
GATB-202ENST00000503160 KIF27Q86VH2 1401 aa21.62■■□□□ 1.05
GATB-202ENST00000503160 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
GATB-202ENST00000503160 CUX2O14529 1486 aa21.61■■□□□ 1.05
GATB-202ENST00000503160 WDR62O43379 1518 aa21.55■■□□□ 1.04
GATB-202ENST00000503160 ABCA10Q8WWZ4 1543 aa21.55■■□□□ 1.04
GATB-202ENST00000503160 THOC2Q8NI27 1593 aaKnown RBP21.52■■□□□ 1.04
GATB-202ENST00000503160 KIF21BO75037 1637 aa21.51■■□□□ 1.03
GATB-202ENST00000503160 WDR97A6NE52 1622 aa21.5■■□□□ 1.03
GATB-202ENST00000503160 GOLGA3Q08378 1498 aa21.49■■□□□ 1.03
GATB-202ENST00000503160 TARBP1Q13395 1621 aaKnown RBP21.46■■□□□ 1.03
GATB-202ENST00000503160 IGF1RP08069 1367 aa21.44■■□□□ 1.02
GATB-202ENST00000503160 PRXQ9BXM0 1461 aa21.44■■□□□ 1.02
GATB-202ENST00000503160 RAPGEF2Q9Y4G8 1499 aa21.44■■□□□ 1.02
GATB-202ENST00000503160 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
GATB-202ENST00000503160 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
GATB-202ENST00000503160 ABCA5Q8WWZ7 1642 aa21.39■■□□□ 1.02
GATB-202ENST00000503160 TNIKQ9UKE5 1360 aa21.39■■□□□ 1.02
GATB-202ENST00000503160 ERICH3Q5RHP9 1530 aa21.38■■□□□ 1.01
GATB-202ENST00000503160 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
GATB-202ENST00000503160 GAPVD1Q14C86 1478 aa21.36■■□□□ 1.01
GATB-202ENST00000503160 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
GATB-202ENST00000503160 AQRO60306 1485 aaKnown RBP eCLIP21.3■■□□□ 1
GATB-202ENST00000503160 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
GATB-202ENST00000503160 CEP162Q5TB80 1403 aa21.29■■□□□ 1
GATB-202ENST00000503160 CUL7Q14999 1698 aa21.28■■□□□ 1
GATB-202ENST00000503160 PBRM1Q86U86 1689 aa21.25■□□□□ 0.99
GATB-202ENST00000503160 EIF4G3O43432 1585 aaKnown RBP21.21■□□□□ 0.99
GATB-202ENST00000503160 GRIN2BQ13224 1484 aa21.2■□□□□ 0.98
GATB-202ENST00000503160 CLIP1P30622 1438 aa21.15■□□□□ 0.98
GATB-202ENST00000503160 RANGAP1P46060 587 aaPredicted RBP21.15■□□□□ 0.98
GATB-202ENST00000503160 ADAMTS12P58397 1594 aa21.13■□□□□ 0.97
GATB-202ENST00000503160 FHAD1B1AJZ9 1412 aa21.12■□□□□ 0.97
GATB-202ENST00000503160 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
GATB-202ENST00000503160 CTTNBP2Q8WZ74 1663 aa21.04■□□□□ 0.96
GATB-202ENST00000503160 MAGI1Q96QZ7 1491 aaPredicted RBP21.03■□□□□ 0.96
GATB-202ENST00000503160 ARHGAP35Q9NRY4 1499 aa20.98■□□□□ 0.95
GATB-202ENST00000503160 ARAP1Q96P48 1450 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms