RNA–Protein interactions for RNA: ENST00000494756.1

RPS27A-209, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-209ENST00000494756 NISCHQ9Y2I1 1504 aa26.58■■□□□ 1.85
RPS27A-209ENST00000494756 ABCC9O60706 1549 aa24.22■■□□□ 1.47
RPS27A-209ENST00000494756 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
RPS27A-209ENST00000494756 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
RPS27A-209ENST00000494756 RB1CC1Q8TDY2 1594 aa22.96■■□□□ 1.27
RPS27A-209ENST00000494756 NACADO15069 1562 aa22.75■■□□□ 1.23
RPS27A-209ENST00000494756 PABPN1Q86U42 306 aaKnown RBP eCLIP22.46■■□□□ 1.19
RPS27A-209ENST00000494756 UNC13AQ9UPW8 1703 aa22.42■■□□□ 1.18
RPS27A-209ENST00000494756 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
RPS27A-209ENST00000494756 MYO15BQ96JP2 1530 aa22.38■■□□□ 1.17
RPS27A-209ENST00000494756 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
RPS27A-209ENST00000494756 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
RPS27A-209ENST00000494756 ZCCHC6Q5VYS8 1495 aaKnown RBP22■■□□□ 1.11
RPS27A-209ENST00000494756 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
RPS27A-209ENST00000494756 CC2D2AQ9P2K1 1620 aa21.88■■□□□ 1.09
RPS27A-209ENST00000494756 CECR2Q9BXF3 1484 aa21.87■■□□□ 1.09
RPS27A-209ENST00000494756 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
RPS27A-209ENST00000494756 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
RPS27A-209ENST00000494756 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
RPS27A-209ENST00000494756 CUX2O14529 1486 aa21.04■□□□□ 0.96
RPS27A-209ENST00000494756 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
RPS27A-209ENST00000494756 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
RPS27A-209ENST00000494756 ATAD2BQ9ULI0 1458 aa20.89■□□□□ 0.94
RPS27A-209ENST00000494756 HMGXB3Q12766 1538 aa20.84■□□□□ 0.93
RPS27A-209ENST00000494756 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
RPS27A-209ENST00000494756 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
RPS27A-209ENST00000494756 NESP48681 1621 aa20.72■□□□□ 0.91
RPS27A-209ENST00000494756 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
RPS27A-209ENST00000494756 BAZ1AQ9NRL2 1556 aaPredicted RBP20.65■□□□□ 0.9
RPS27A-209ENST00000494756 PEG3Q9GZU2 1588 aa20.63■□□□□ 0.89
RPS27A-209ENST00000494756 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
RPS27A-209ENST00000494756 LAMC3Q9Y6N6 1575 aa20.57■□□□□ 0.88
RPS27A-209ENST00000494756 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
RPS27A-209ENST00000494756 KIF21AQ7Z4S6 1674 aa20.45■□□□□ 0.86
RPS27A-209ENST00000494756 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
RPS27A-209ENST00000494756 CADPSQ9ULU8 1353 aa20.33■□□□□ 0.84
RPS27A-209ENST00000494756 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
RPS27A-209ENST00000494756 WDR62O43379 1518 aa20.28■□□□□ 0.84
RPS27A-209ENST00000494756 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
RPS27A-209ENST00000494756 WIZO95785 1651 aa20.17■□□□□ 0.82
RPS27A-209ENST00000494756 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
RPS27A-209ENST00000494756 FANCD2Q9BXW9 1451 aa20.11■□□□□ 0.81
RPS27A-209ENST00000494756 CFTRP13569 1480 aa20.06■□□□□ 0.8
RPS27A-209ENST00000494756 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
RPS27A-209ENST00000494756 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
RPS27A-209ENST00000494756 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
RPS27A-209ENST00000494756 RSF1Q96T23 1441 aaPredicted RBP19.93■□□□□ 0.78
RPS27A-209ENST00000494756 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
RPS27A-209ENST00000494756 RIMBP3CA6NJZ7 1639 aa19.77■□□□□ 0.76
RPS27A-209ENST00000494756 RIMBP3BA6NNM3 1639 aa19.77■□□□□ 0.76
RPS27A-209ENST00000494756 RIMBP3Q9UFD9 1639 aa19.77■□□□□ 0.76
RPS27A-209ENST00000494756 IFT140Q96RY7 1462 aa19.77■□□□□ 0.76
RPS27A-209ENST00000494756 ZNF608Q9ULD9 1512 aaPredicted RBP19.76■□□□□ 0.75
RPS27A-209ENST00000494756 ARHGEF11O15085 1522 aa19.7■□□□□ 0.74
RPS27A-209ENST00000494756 TOPBP1Q92547 1522 aa19.7■□□□□ 0.74
RPS27A-209ENST00000494756 CCDC88BA6NC98 1476 aa19.69■□□□□ 0.74
RPS27A-209ENST00000494756 EIF4G3O43432 1585 aaKnown RBP19.65■□□□□ 0.74
RPS27A-209ENST00000494756 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
RPS27A-209ENST00000494756 DNMBPQ6XZF7 1577 aa19.61■□□□□ 0.73
RPS27A-209ENST00000494756 TARBP1Q13395 1621 aaKnown RBP19.54■□□□□ 0.72
RPS27A-209ENST00000494756 CHD1O14646 1710 aa19.52■□□□□ 0.72
RPS27A-209ENST00000494756 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.715e-10■■■■■ 62.7
RPS27A-209ENST00000494756 ARAP1Q96P48 1450 aa19.49■□□□□ 0.71
RPS27A-209ENST00000494756 CYB5RLQ6IPT4 315 aa19.49■□□□□ 0.71
RPS27A-209ENST00000494756 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
RPS27A-209ENST00000494756 FBLN2P98095 1184 aa19.38■□□□□ 0.69
RPS27A-209ENST00000494756 RAD54L2Q9Y4B4 1467 aa19.38■□□□□ 0.69
RPS27A-209ENST00000494756 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
RPS27A-209ENST00000494756 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
RPS27A-209ENST00000494756 SOGA1O94964 1423 aa19.34■□□□□ 0.69
RPS27A-209ENST00000494756 TDRD9Q8NDG6 1382 aaKnown RBP19.34■□□□□ 0.69
RPS27A-209ENST00000494756 TRHP20396 242 aaPredicted RBP19.34■□□□□ 0.69
RPS27A-209ENST00000494756 SNAPC4Q5SXM2 1469 aa19.34■□□□□ 0.69
RPS27A-209ENST00000494756 FGD5Q6ZNL6 1462 aa19.3■□□□□ 0.68
RPS27A-209ENST00000494756 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
RPS27A-209ENST00000494756 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
RPS27A-209ENST00000494756 CUX1P39880 1505 aa19.25■□□□□ 0.67
RPS27A-209ENST00000494756 GRIN2BQ13224 1484 aa19.24■□□□□ 0.67
RPS27A-209ENST00000494756 SYNJ2O15056 1496 aa19.22■□□□□ 0.67
RPS27A-209ENST00000494756 CHMP7Q8WUX9 453 aaPredicted RBP19.22■□□□□ 0.67
RPS27A-209ENST00000494756 PBRM1Q86U86 1689 aa19.14■□□□□ 0.65
RPS27A-209ENST00000494756 GAPVD1Q14C86 1478 aa19.13■□□□□ 0.65
RPS27A-209ENST00000494756 ABCA5Q8WWZ7 1642 aa19.1■□□□□ 0.65
RPS27A-209ENST00000494756 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
RPS27A-209ENST00000494756 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
RPS27A-209ENST00000494756 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
RPS27A-209ENST00000494756 ERCC6L2Q5T890 1561 aa18.98■□□□□ 0.63
RPS27A-209ENST00000494756 NUP160Q12769 1436 aa18.98■□□□□ 0.63
RPS27A-209ENST00000494756 ADAMTS12P58397 1594 aa18.98■□□□□ 0.63
RPS27A-209ENST00000494756 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
RPS27A-209ENST00000494756 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.626e-18■□□□□ 8
RPS27A-209ENST00000494756 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
RPS27A-209ENST00000494756 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.61
RPS27A-209ENST00000494756 BIVM-ERCC5R4GMW8 1640 aa18.87■□□□□ 0.61
RPS27A-209ENST00000494756 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
RPS27A-209ENST00000494756 ERICH3Q5RHP9 1530 aa18.84■□□□□ 0.61
RPS27A-209ENST00000494756 KIF13AQ9H1H9 1805 aa18.79■□□□□ 0.6
RPS27A-209ENST00000494756 PRG4Q92954 1404 aaPredicted RBP18.75■□□□□ 0.59
RPS27A-209ENST00000494756 SUPT5HO00267 1087 aaKnown RBP18.73■□□□□ 0.59
RPS27A-209ENST00000494756 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms