RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, humanhuman

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27A-208ENST00000478196 AEBP2Q6ZN18 517 aaPredicted RBP26.51■■□□□ 1.83
RPS27A-208ENST00000478196 CHIC1Q5VXU3 224 aa25.07■■□□□ 1.6
RPS27A-208ENST00000478196 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
RPS27A-208ENST00000478196 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
RPS27A-208ENST00000478196 FOXD1Q16676 465 aa21.14■□□□□ 0.97
RPS27A-208ENST00000478196 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
RPS27A-208ENST00000478196 MSH5O43196 834 aa19.9■□□□□ 0.78
RPS27A-208ENST00000478196 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
RPS27A-208ENST00000478196 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
RPS27A-208ENST00000478196 PPP6R1Q9UPN7 881 aa19.63■□□□□ 0.73
RPS27A-208ENST00000478196 ADRA2BP18089 450 aa19.57■□□□□ 0.72
RPS27A-208ENST00000478196 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
RPS27A-208ENST00000478196 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
RPS27A-208ENST00000478196 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
RPS27A-208ENST00000478196 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
RPS27A-208ENST00000478196 HOXD11P31277 338 aaPredicted RBP17.25■□□□□ 0.35
RPS27A-208ENST00000478196 DCAF8L1A6NGE4 600 aa17.24■□□□□ 0.35
RPS27A-208ENST00000478196 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
RPS27A-208ENST00000478196 CACNB1Q02641 598 aaPredicted RBP17.16■□□□□ 0.34
RPS27A-208ENST00000478196 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
RPS27A-208ENST00000478196 RNF39Q9H2S5 420 aa16.94■□□□□ 0.3
RPS27A-208ENST00000478196 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
RPS27A-208ENST00000478196 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
RPS27A-208ENST00000478196 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
RPS27A-208ENST00000478196 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
RPS27A-208ENST00000478196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.45■□□□□ 0.222e-7■□□□□ 11.1
RPS27A-208ENST00000478196 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
RPS27A-208ENST00000478196 KCNA4P22459 653 aa16.04■□□□□ 0.16
RPS27A-208ENST00000478196 CAPN15O75808 1086 aa15.87■□□□□ 0.13
RPS27A-208ENST00000478196 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
RPS27A-208ENST00000478196 DSG3P32926 999 aa15.8■□□□□ 0.12
RPS27A-208ENST00000478196 SLC4A2P04920 1241 aa15.79■□□□□ 0.12
RPS27A-208ENST00000478196 APLP2Q06481 763 aa15.69■□□□□ 0.1
RPS27A-208ENST00000478196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.63■□□□□ 0.09
RPS27A-208ENST00000478196 HNRNPUL2Q1KMD3 747 aaKnown RBP15.63■□□□□ 0.09
RPS27A-208ENST00000478196 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
RPS27A-208ENST00000478196 ZNF219Q9P2Y4 722 aaPredicted RBP15.57■□□□□ 0.08
RPS27A-208ENST00000478196 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
RPS27A-208ENST00000478196 ABCB7O75027 752 aa15.46■□□□□ 0.07
RPS27A-208ENST00000478196 POTEHQ6S545 545 aa15.37■□□□□ 0.05
RPS27A-208ENST00000478196 MYCNP04198 464 aaPredicted RBP15.31■□□□□ 0.04
RPS27A-208ENST00000478196 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
RPS27A-208ENST00000478196 RBM42Q9BTD8 480 aaKnown RBP15.14■□□□□ 0.01
RPS27A-208ENST00000478196 POLA2Q14181 598 aa15.13■□□□□ 0.01
RPS27A-208ENST00000478196 FOXD4L1Q9NU39 408 aa15.05■□□□□ -0
RPS27A-208ENST00000478196 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
RPS27A-208ENST00000478196 ZBTB12Q9Y330 459 aaPredicted RBP14.86□□□□□ -0.03
RPS27A-208ENST00000478196 CHRDL2Q6WN34 429 aa14.83□□□□□ -0.04
RPS27A-208ENST00000478196 AKT1S1Q96B36 256 aa14.74□□□□□ -0.05
RPS27A-208ENST00000478196 ZBTB22O15209 634 aa14.71□□□□□ -0.05
RPS27A-208ENST00000478196 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
RPS27A-208ENST00000478196 OSCARQ8IYS5 282 aa14.62□□□□□ -0.07
RPS27A-208ENST00000478196 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.08
RPS27A-208ENST00000478196 FBLN2P98095 1184 aa14.42□□□□□ -0.1
RPS27A-208ENST00000478196 PIP4P2Q8N4L2 257 aa14.42□□□□□ -0.1
RPS27A-208ENST00000478196 PITPNM1O00562 1244 aa14.41□□□□□ -0.1
RPS27A-208ENST00000478196 SPDYE2BA6NHP3 402 aa14.37□□□□□ -0.11
RPS27A-208ENST00000478196 SPDYE6P0CI01 402 aa14.37□□□□□ -0.11
RPS27A-208ENST00000478196 SPDYE2Q495Y8 402 aa14.37□□□□□ -0.11
RPS27A-208ENST00000478196 SP7Q8TDD2 431 aaPredicted RBP14.34□□□□□ -0.11
RPS27A-208ENST00000478196 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
RPS27A-208ENST00000478196 HAX1O00165 279 aa14.24□□□□□ -0.13
RPS27A-208ENST00000478196 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
RPS27A-208ENST00000478196 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
RPS27A-208ENST00000478196 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
RPS27A-208ENST00000478196 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
RPS27A-208ENST00000478196 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
RPS27A-208ENST00000478196 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
RPS27A-208ENST00000478196 EVX2Q03828 476 aa13.98□□□□□ -0.17
RPS27A-208ENST00000478196 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
RPS27A-208ENST00000478196 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
RPS27A-208ENST00000478196 C19orf67A6NJJ6 358 aa13.88□□□□□ -0.19
RPS27A-208ENST00000478196 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
RPS27A-208ENST00000478196 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
RPS27A-208ENST00000478196 GABBR2O75899 941 aa13.7□□□□□ -0.22
RPS27A-208ENST00000478196 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
RPS27A-208ENST00000478196 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
RPS27A-208ENST00000478196 CD44P16070 742 aaKnown RBP13.6□□□□□ -0.23
RPS27A-208ENST00000478196 STAG3Q9UJ98 1225 aa13.57□□□□□ -0.24
RPS27A-208ENST00000478196 CLCN6P51797 869 aa13.53□□□□□ -0.24
RPS27A-208ENST00000478196 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
RPS27A-208ENST00000478196 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
RPS27A-208ENST00000478196 LHX8Q68G74 356 aa13.45□□□□□ -0.26
RPS27A-208ENST00000478196 POTEIP0CG38 1075 aa13.38□□□□□ -0.27
RPS27A-208ENST00000478196 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
RPS27A-208ENST00000478196 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
RPS27A-208ENST00000478196 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
RPS27A-208ENST00000478196 PAK3O75914 559 aaPredicted RBP13.29□□□□□ -0.28
RPS27A-208ENST00000478196 NPM1P06748 294 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPS27A-208ENST00000478196 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
RPS27A-208ENST00000478196 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
RPS27A-208ENST00000478196 PROM2Q8N271 834 aa13.15□□□□□ -0.3
RPS27A-208ENST00000478196 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
RPS27A-208ENST00000478196 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
RPS27A-208ENST00000478196 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
RPS27A-208ENST00000478196 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
RPS27A-208ENST00000478196 ASTLQ6HA08 431 aaPredicted RBP12.95□□□□□ -0.34
RPS27A-208ENST00000478196 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
RPS27A-208ENST00000478196 POTEB2H3BUK9 544 aa12.93□□□□□ -0.34
RPS27A-208ENST00000478196 MIER1Q8N108 512 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms