RNA–Protein interactions for RNA: ENST00000463574.1

HLA-B-251, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-251ENST00000463574 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
HLA-B-251ENST00000463574 ABCC9O60706 1549 aa27.97■■■□□ 2.07
HLA-B-251ENST00000463574 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
HLA-B-251ENST00000463574 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
HLA-B-251ENST00000463574 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
HLA-B-251ENST00000463574 NACADO15069 1562 aa26.31■■□□□ 1.8
HLA-B-251ENST00000463574 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
HLA-B-251ENST00000463574 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
HLA-B-251ENST00000463574 UNC13AQ9UPW8 1703 aa25.95■■□□□ 1.74
HLA-B-251ENST00000463574 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
HLA-B-251ENST00000463574 BICRAQ9NZM4 1560 aa25.76■■□□□ 1.71
HLA-B-251ENST00000463574 ZCCHC6Q5VYS8 1495 aaKnown RBP25.58■■□□□ 1.69
HLA-B-251ENST00000463574 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
HLA-B-251ENST00000463574 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
HLA-B-251ENST00000463574 SCRIBQ14160 1630 aa25.34■■□□□ 1.65
HLA-B-251ENST00000463574 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
HLA-B-251ENST00000463574 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
HLA-B-251ENST00000463574 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.62
HLA-B-251ENST00000463574 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
HLA-B-251ENST00000463574 NCAPD3P42695 1498 aa24.3■■□□□ 1.48
HLA-B-251ENST00000463574 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
HLA-B-251ENST00000463574 ERCC6Q03468 1493 aa24.16■■□□□ 1.46
HLA-B-251ENST00000463574 SMARCA4P51532 1647 aa24.14■■□□□ 1.46
HLA-B-251ENST00000463574 SMARCA2P51531 1590 aa24.13■■□□□ 1.45
HLA-B-251ENST00000463574 CUX2O14529 1486 aa24.12■■□□□ 1.45
HLA-B-251ENST00000463574 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
HLA-B-251ENST00000463574 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
HLA-B-251ENST00000463574 BAZ1BQ9UIG0 1483 aaKnown RBP23.98■■□□□ 1.43
HLA-B-251ENST00000463574 NESP48681 1621 aa23.98■■□□□ 1.43
HLA-B-251ENST00000463574 PEG3Q9GZU2 1588 aa23.89■■□□□ 1.41
HLA-B-251ENST00000463574 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
HLA-B-251ENST00000463574 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
HLA-B-251ENST00000463574 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
HLA-B-251ENST00000463574 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
HLA-B-251ENST00000463574 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
HLA-B-251ENST00000463574 CADPSQ9ULU8 1353 aa23.57■■□□□ 1.36
HLA-B-251ENST00000463574 WIZO95785 1651 aa23.55■■□□□ 1.36
HLA-B-251ENST00000463574 MRC2Q9UBG0 1479 aa23.44■■□□□ 1.34
HLA-B-251ENST00000463574 WDR62O43379 1518 aa23.37■■□□□ 1.33
HLA-B-251ENST00000463574 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
HLA-B-251ENST00000463574 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
HLA-B-251ENST00000463574 RSF1Q96T23 1441 aaPredicted RBP23.3■■□□□ 1.32
HLA-B-251ENST00000463574 CFTRP13569 1480 aa23.26■■□□□ 1.31
HLA-B-251ENST00000463574 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
HLA-B-251ENST00000463574 TOP2AP11388 1531 aaKnown RBP23.22■■□□□ 1.31
HLA-B-251ENST00000463574 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
HLA-B-251ENST00000463574 OSCARQ8IYS5 282 aa23.06■■□□□ 1.28
HLA-B-251ENST00000463574 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
HLA-B-251ENST00000463574 CCDC88BA6NC98 1476 aa22.98■■□□□ 1.27
HLA-B-251ENST00000463574 IFT140Q96RY7 1462 aa22.87■■□□□ 1.25
HLA-B-251ENST00000463574 ZNF608Q9ULD9 1512 aaPredicted RBP22.86■■□□□ 1.25
HLA-B-251ENST00000463574 TOPBP1Q92547 1522 aa22.84■■□□□ 1.25
HLA-B-251ENST00000463574 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
HLA-B-251ENST00000463574 DNMBPQ6XZF7 1577 aa22.74■■□□□ 1.23
HLA-B-251ENST00000463574 RIMBP3CA6NJZ7 1639 aa22.74■■□□□ 1.23
HLA-B-251ENST00000463574 RIMBP3BA6NNM3 1639 aa22.74■■□□□ 1.23
HLA-B-251ENST00000463574 RIMBP3Q9UFD9 1639 aa22.74■■□□□ 1.23
HLA-B-251ENST00000463574 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
HLA-B-251ENST00000463574 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
HLA-B-251ENST00000463574 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.22
HLA-B-251ENST00000463574 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.21
HLA-B-251ENST00000463574 SUPT5HO00267 1087 aaKnown RBP22.63■■□□□ 1.21
HLA-B-251ENST00000463574 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
HLA-B-251ENST00000463574 CHD1O14646 1710 aa22.59■■□□□ 1.21
HLA-B-251ENST00000463574 FBLN2P98095 1184 aa22.58■■□□□ 1.21
HLA-B-251ENST00000463574 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
HLA-B-251ENST00000463574 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
HLA-B-251ENST00000463574 SOGA1O94964 1423 aa22.51■■□□□ 1.19
HLA-B-251ENST00000463574 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
HLA-B-251ENST00000463574 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
HLA-B-251ENST00000463574 ARAP1Q96P48 1450 aa22.41■■□□□ 1.18
HLA-B-251ENST00000463574 CUX1P39880 1505 aa22.4■■□□□ 1.18
HLA-B-251ENST00000463574 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
HLA-B-251ENST00000463574 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
HLA-B-251ENST00000463574 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
HLA-B-251ENST00000463574 TRHP20396 242 aaPredicted RBP22.36■■□□□ 1.17
HLA-B-251ENST00000463574 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
HLA-B-251ENST00000463574 MAGI1Q96QZ7 1491 aaPredicted RBP22.32■■□□□ 1.16
HLA-B-251ENST00000463574 CLASP1Q7Z460 1538 aa22.29■■□□□ 1.16
HLA-B-251ENST00000463574 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
HLA-B-251ENST00000463574 SYNJ2O15056 1496 aa22.25■■□□□ 1.15
HLA-B-251ENST00000463574 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
HLA-B-251ENST00000463574 PBRM1Q86U86 1689 aa22.22■■□□□ 1.15
HLA-B-251ENST00000463574 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
HLA-B-251ENST00000463574 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
HLA-B-251ENST00000463574 WRNQ14191 1432 aaPredicted RBP eCLIP22.07■■□□□ 1.12
HLA-B-251ENST00000463574 GRIN2AQ12879 1464 aa22.03■■□□□ 1.12
HLA-B-251ENST00000463574 TOP2BQ02880 1626 aa22■■□□□ 1.11
HLA-B-251ENST00000463574 BIVM-ERCC5R4GMW8 1640 aa22■■□□□ 1.11
HLA-B-251ENST00000463574 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
HLA-B-251ENST00000463574 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.11
HLA-B-251ENST00000463574 NUP160Q12769 1436 aa21.95■■□□□ 1.1
HLA-B-251ENST00000463574 CEP170Q5SW79 1584 aa21.95■■□□□ 1.1
HLA-B-251ENST00000463574 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
HLA-B-251ENST00000463574 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
HLA-B-251ENST00000463574 SHROOM2Q13796 1616 aa21.86■■□□□ 1.09
HLA-B-251ENST00000463574 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
HLA-B-251ENST00000463574 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
HLA-B-251ENST00000463574 PRG4Q92954 1404 aaPredicted RBP21.78■■□□□ 1.08
HLA-B-251ENST00000463574 KIF13AQ9H1H9 1805 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms