RNA–Protein interactions for RNA: ENST00000515564.5

GATB-212, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 6,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-212ENST00000515564 DCAF8L2P0C7V8 631 aa15.02■□□□□ -0
GATB-212ENST00000515564 SUPT5HO00267 1087 aaKnown RBP13.75□□□□□ -0.21
GATB-212ENST00000515564 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.23
GATB-212ENST00000515564 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
GATB-212ENST00000515564 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
GATB-212ENST00000515564 FAM9AQ8IZU1 332 aaPredicted RBP13.44□□□□□ -0.26
GATB-212ENST00000515564 APLP2Q06481 763 aa13.3□□□□□ -0.28
GATB-212ENST00000515564 RANGAP1P46060 587 aaPredicted RBP13.1□□□□□ -0.31
GATB-212ENST00000515564 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
GATB-212ENST00000515564 TTBK1Q5TCY1 1321 aaPredicted RBP13.05□□□□□ -0.32
GATB-212ENST00000515564 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
GATB-212ENST00000515564 MYT1LQ9UL68 1186 aa12.81□□□□□ -0.36
GATB-212ENST00000515564 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
GATB-212ENST00000515564 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
GATB-212ENST00000515564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
GATB-212ENST00000515564 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
GATB-212ENST00000515564 PCGF6Q9BYE7 350 aa12.64□□□□□ -0.39
GATB-212ENST00000515564 CHIC1Q5VXU3 224 aa12.58□□□□□ -0.4
GATB-212ENST00000515564 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
GATB-212ENST00000515564 ERICH6Q7L0X2 663 aa12.39□□□□□ -0.43
GATB-212ENST00000515564 POLR3GLQ9BT43 218 aa12.38□□□□□ -0.43
GATB-212ENST00000515564 ITGAEP38570 1179 aa12.37□□□□□ -0.43
GATB-212ENST00000515564 PPARGC1BQ86YN6 1023 aaKnown RBP12.35□□□□□ -0.43
GATB-212ENST00000515564 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
GATB-212ENST00000515564 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
GATB-212ENST00000515564 ABCC9O60706 1549 aa12.28□□□□□ -0.44
GATB-212ENST00000515564 FBLN2P98095 1184 aa12.25□□□□□ -0.45
GATB-212ENST00000515564 NEFLP07196 543 aa12.23□□□□□ -0.45
GATB-212ENST00000515564 ZEB1P37275 1124 aaPredicted RBP12.23□□□□□ -0.45
GATB-212ENST00000515564 CENPBP07199 599 aaPredicted RBP12.22□□□□□ -0.45
GATB-212ENST00000515564 CNGB1Q14028 1251 aaPredicted RBP12.22□□□□□ -0.45
GATB-212ENST00000515564 YTHDC1Q96MU7 727 aaKnown RBP12.17□□□□□ -0.46
GATB-212ENST00000515564 BCANQ96GW7 911 aa12.1□□□□□ -0.47
GATB-212ENST00000515564 FAM50AQ14320 339 aaKnown RBP12.05□□□□□ -0.48
GATB-212ENST00000515564 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
GATB-212ENST00000515564 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.49
GATB-212ENST00000515564 DAXXQ9UER7 740 aaPredicted RBP12.01□□□□□ -0.49
GATB-212ENST00000515564 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
GATB-212ENST00000515564 ESF1Q9H501 851 aaKnown RBP11.96□□□□□ -0.49
GATB-212ENST00000515564 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
GATB-212ENST00000515564 ZNF326Q5BKZ1 582 aaKnown RBP11.9□□□□□ -0.5
GATB-212ENST00000515564 LOC105371045A0A1W2PR82 267 aa11.9□□□□□ -0.5
GATB-212ENST00000515564 TRIM26Q12899 539 aaPredicted RBP11.89□□□□□ -0.51
GATB-212ENST00000515564 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
GATB-212ENST00000515564 CLSPNQ9HAW4 1339 aa11.85□□□□□ -0.51
GATB-212ENST00000515564 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
GATB-212ENST00000515564 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
GATB-212ENST00000515564 ZNF777Q9ULD5 760 aaPredicted RBP11.83□□□□□ -0.52
GATB-212ENST00000515564 STAG3Q9UJ98 1225 aa11.82□□□□□ -0.52
GATB-212ENST00000515564 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
GATB-212ENST00000515564 BCL11AQ9H165 835 aa11.76□□□□□ -0.53
GATB-212ENST00000515564 NEFMP07197 916 aa11.75□□□□□ -0.53
GATB-212ENST00000515564 CHGAP10645 457 aaKnown RBP11.75□□□□□ -0.53
GATB-212ENST00000515564 CDK11AQ9UQ88 783 aaPredicted RBP11.7□□□□□ -0.54
GATB-212ENST00000515564 ZNF316A6NFI3 1004 aaPredicted RBP11.7□□□□□ -0.54
GATB-212ENST00000515564 SCAF1Q9H7N4 1312 aaKnown RBP11.68□□□□□ -0.54
GATB-212ENST00000515564 CANXP27824 592 aaKnown RBP11.65□□□□□ -0.54
GATB-212ENST00000515564 MYT1Q01538 1121 aa11.64□□□□□ -0.55
GATB-212ENST00000515564 HRCP23327 699 aa11.63□□□□□ -0.55
GATB-212ENST00000515564 A0A0G2JS52 829 aa11.62□□□□□ -0.55
GATB-212ENST00000515564 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
GATB-212ENST00000515564 SCRIBQ14160 1630 aa11.58□□□□□ -0.56
GATB-212ENST00000515564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.57□□□□□ -0.56
GATB-212ENST00000515564 PLEKHG5O94827 1062 aa11.55□□□□□ -0.56
GATB-212ENST00000515564 ANP32CO43423 234 aa11.55□□□□□ -0.56
GATB-212ENST00000515564 ARID4BQ4LE39 1312 aaPredicted RBP11.53□□□□□ -0.56
GATB-212ENST00000515564 ZBTB7CA1YPR0 619 aa11.52□□□□□ -0.57
GATB-212ENST00000515564 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
GATB-212ENST00000515564 SENP3Q9H4L4 574 aaPredicted RBP11.51□□□□□ -0.57
GATB-212ENST00000515564 CSRNP3Q8WYN3 585 aa11.49□□□□□ -0.57
GATB-212ENST00000515564 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
GATB-212ENST00000515564 KCNH8Q96L42 1107 aa11.47□□□□□ -0.57
GATB-212ENST00000515564 DIEXFQ68CQ4 756 aaKnown RBP11.46□□□□□ -0.57
GATB-212ENST00000515564 HAP1P54257 671 aaPredicted RBP11.46□□□□□ -0.57
GATB-212ENST00000515564 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
GATB-212ENST00000515564 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
GATB-212ENST00000515564 CHIC2Q9UKJ5 165 aa11.43□□□□□ -0.58
GATB-212ENST00000515564 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
GATB-212ENST00000515564 TSPY4P0CV99 314 aa11.41□□□□□ -0.58
GATB-212ENST00000515564 TSPY10P0CW01 314 aa11.41□□□□□ -0.58
GATB-212ENST00000515564 ERCC6Q03468 1493 aa11.39□□□□□ -0.59
GATB-212ENST00000515564 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
GATB-212ENST00000515564 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
GATB-212ENST00000515564 ARXQ96QS3 562 aa11.3□□□□□ -0.6
GATB-212ENST00000515564 PLEKHD1A6NEE1 506 aa11.3□□□□□ -0.6
GATB-212ENST00000515564 RB1CC1Q8TDY2 1594 aa11.28□□□□□ -0.6
GATB-212ENST00000515564 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
GATB-212ENST00000515564 SALL2Q9Y467 1007 aaPredicted RBP11.28□□□□□ -0.6
GATB-212ENST00000515564 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
GATB-212ENST00000515564 WDR43Q15061 677 aaKnown RBP eCLIP11.24□□□□□ -0.61
GATB-212ENST00000515564 NPHP1O15259 732 aa11.23□□□□□ -0.61
GATB-212ENST00000515564 HSP90AA1P07900 732 aaKnown RBP11.23□□□□□ -0.61
GATB-212ENST00000515564 TMC1Q8TDI8 760 aa11.23□□□□□ -0.61
GATB-212ENST00000515564 MLECQ14165 292 aa11.22□□□□□ -0.61
GATB-212ENST00000515564 FAM9BQ8IZU0 186 aa11.2□□□□□ -0.62
GATB-212ENST00000515564 RRP7BPQ9NSQ0 103 aa11.19□□□□□ -0.62
GATB-212ENST00000515564 RGL3Q3MIN7 710 aa11.18□□□□□ -0.62
GATB-212ENST00000515564 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
GATB-212ENST00000515564 MYH16Q9H6N6 1097 aa11.14□□□□□ -0.63
GATB-212ENST00000515564 UPF2Q9HAU5 1272 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms