RNA–Protein interactions for RNA: ENST00000613781.1

TTR-205, Transcript of transthyretin, humanhuman

TSL 5 BASIC

Gene TTR, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-205ENST00000613781 NISCHQ9Y2I1 1504 aa22.35■■□□□ 1.17
TTR-205ENST00000613781 ABCC9O60706 1549 aa20.42■□□□□ 0.86
TTR-205ENST00000613781 CCDC180Q9P1Z9 1646 aa20.13■□□□□ 0.81
TTR-205ENST00000613781 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
TTR-205ENST00000613781 RB1CC1Q8TDY2 1594 aa19.28■□□□□ 0.68
TTR-205ENST00000613781 NACADO15069 1562 aa19.09■□□□□ 0.65
TTR-205ENST00000613781 PABPN1Q86U42 306 aaKnown RBP eCLIP18.98■□□□□ 0.63
TTR-205ENST00000613781 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
TTR-205ENST00000613781 UNC13AQ9UPW8 1703 aa18.86■□□□□ 0.61
TTR-205ENST00000613781 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
TTR-205ENST00000613781 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
TTR-205ENST00000613781 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
TTR-205ENST00000613781 SHROOM4Q9ULL8 1493 aa18.45■□□□□ 0.54
TTR-205ENST00000613781 DCAF1Q9Y4B6 1507 aa18.42■□□□□ 0.54
TTR-205ENST00000613781 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
TTR-205ENST00000613781 CECR2Q9BXF3 1484 aa18.4■□□□□ 0.54
TTR-205ENST00000613781 SCRIBQ14160 1630 aa18.37■□□□□ 0.53
TTR-205ENST00000613781 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
TTR-205ENST00000613781 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
TTR-205ENST00000613781 CUX2O14529 1486 aa17.66■□□□□ 0.42
TTR-205ENST00000613781 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
TTR-205ENST00000613781 ERCC6Q03468 1493 aa17.61■□□□□ 0.41
TTR-205ENST00000613781 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
TTR-205ENST00000613781 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
TTR-205ENST00000613781 NESP48681 1621 aa17.49■□□□□ 0.39
TTR-205ENST00000613781 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
TTR-205ENST00000613781 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
TTR-205ENST00000613781 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
TTR-205ENST00000613781 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
TTR-205ENST00000613781 THOC2Q8NI27 1593 aaKnown RBP17.34■□□□□ 0.37
TTR-205ENST00000613781 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
TTR-205ENST00000613781 LAMC3Q9Y6N6 1575 aa17.27■□□□□ 0.35
TTR-205ENST00000613781 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
TTR-205ENST00000613781 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
TTR-205ENST00000613781 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
TTR-205ENST00000613781 CADPSQ9ULU8 1353 aa17.1■□□□□ 0.33
TTR-205ENST00000613781 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
TTR-205ENST00000613781 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
TTR-205ENST00000613781 WDR62O43379 1518 aa17.04■□□□□ 0.32
TTR-205ENST00000613781 WIZO95785 1651 aa17.01■□□□□ 0.31
TTR-205ENST00000613781 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
TTR-205ENST00000613781 FANCD2Q9BXW9 1451 aa16.92■□□□□ 0.3
TTR-205ENST00000613781 CFTRP13569 1480 aa16.86■□□□□ 0.29
TTR-205ENST00000613781 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
TTR-205ENST00000613781 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
TTR-205ENST00000613781 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
TTR-205ENST00000613781 TOP2AP11388 1531 aaKnown RBP16.76■□□□□ 0.27
TTR-205ENST00000613781 ZNF608Q9ULD9 1512 aaPredicted RBP16.65■□□□□ 0.26
TTR-205ENST00000613781 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
TTR-205ENST00000613781 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
TTR-205ENST00000613781 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
TTR-205ENST00000613781 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
TTR-205ENST00000613781 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
TTR-205ENST00000613781 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
TTR-205ENST00000613781 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
TTR-205ENST00000613781 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
TTR-205ENST00000613781 EIF4G3O43432 1585 aaKnown RBP16.52■□□□□ 0.24
TTR-205ENST00000613781 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
TTR-205ENST00000613781 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
TTR-205ENST00000613781 CYB5RLQ6IPT4 315 aa16.45■□□□□ 0.22
TTR-205ENST00000613781 AQRO60306 1485 aaKnown RBP eCLIP16.45■□□□□ 0.22
TTR-205ENST00000613781 CHD1O14646 1710 aa16.44■□□□□ 0.22
TTR-205ENST00000613781 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
TTR-205ENST00000613781 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
TTR-205ENST00000613781 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
TTR-205ENST00000613781 FBLN2P98095 1184 aa16.36■□□□□ 0.21
TTR-205ENST00000613781 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
TTR-205ENST00000613781 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
TTR-205ENST00000613781 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
TTR-205ENST00000613781 SOGA1O94964 1423 aa16.29■□□□□ 0.2
TTR-205ENST00000613781 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
TTR-205ENST00000613781 CLASP1Q7Z460 1538 aa16.26■□□□□ 0.19
TTR-205ENST00000613781 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
TTR-205ENST00000613781 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
TTR-205ENST00000613781 CUX1P39880 1505 aa16.2■□□□□ 0.18
TTR-205ENST00000613781 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
TTR-205ENST00000613781 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
TTR-205ENST00000613781 CHMP7Q8WUX9 453 aaPredicted RBP16.19■□□□□ 0.18
TTR-205ENST00000613781 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
TTR-205ENST00000613781 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
TTR-205ENST00000613781 PBRM1Q86U86 1689 aa16.09■□□□□ 0.17
TTR-205ENST00000613781 GAPVD1Q14C86 1478 aa16.09■□□□□ 0.17
TTR-205ENST00000613781 ABCA10Q8WWZ4 1543 aa16.04■□□□□ 0.16
TTR-205ENST00000613781 ABCA5Q8WWZ7 1642 aa16.04■□□□□ 0.16
TTR-205ENST00000613781 ERCC6L2Q5T890 1561 aa16.01■□□□□ 0.15
TTR-205ENST00000613781 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
TTR-205ENST00000613781 GRIN2AQ12879 1464 aa15.97■□□□□ 0.15
TTR-205ENST00000613781 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
TTR-205ENST00000613781 CEP170Q5SW79 1584 aa15.95■□□□□ 0.14
TTR-205ENST00000613781 NUP160Q12769 1436 aa15.94■□□□□ 0.14
TTR-205ENST00000613781 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
TTR-205ENST00000613781 SHROOM2Q13796 1616 aa15.89■□□□□ 0.13
TTR-205ENST00000613781 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
TTR-205ENST00000613781 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
TTR-205ENST00000613781 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
TTR-205ENST00000613781 SUPT5HO00267 1087 aaKnown RBP15.84■□□□□ 0.13
TTR-205ENST00000613781 ERICH3Q5RHP9 1530 aa15.82■□□□□ 0.12
TTR-205ENST00000613781 KIF13AQ9H1H9 1805 aa15.8■□□□□ 0.12
TTR-205ENST00000613781 PRG4Q92954 1404 aaPredicted RBP15.8■□□□□ 0.12
TTR-205ENST00000613781 JPH4Q96JJ6 628 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms