Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC9.93□□□□□ -0.824e-6■■□□□ 12.7
SND1Q7KZF4 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC9.87□□□□□ -0.834e-6■■□□□ 12.7
SND1Q7KZF4 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.844e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.894e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-203ENST00000429728 566 ntTSL 29.35□□□□□ -0.914e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-227ENST00000556897 1252 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.914e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-207ENST00000553614 604 ntTSL 59.35□□□□□ -0.914e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.17□□□□□ -0.944e-6■■□□□ 12.7
SND1Q7KZF4 CD84-203ENST00000368047 856 ntTSL 1 (best)9.16□□□□□ -0.944e-6■■□□□ 12.7
SND1Q7KZF4 MBNL1-215ENST00000477171 1039 ntTSL 38.84□□□□□ -0.992e-8■■□□□ 12.7
SND1Q7KZF4 HNRNPC-212ENST00000554539 748 ntTSL 58.84□□□□□ -0.994e-6■■□□□ 12.7
SND1Q7KZF4 GART-209ENST00000438059 697 ntTSL 38.58□□□□□ -1.045e-9■■□□□ 12.7
SND1Q7KZF4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.084e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.094e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.95□□□□□ -1.144e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-209ENST00000488400 393 ntTSL 27.81□□□□□ -1.164e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.65□□□□□ -1.184e-6■■□□□ 12.7
SND1Q7KZF4 MBNL1-210ENST00000461436 1681 ntTSL 57.54□□□□□ -1.22e-8■■□□□ 12.7
SND1Q7KZF4 CALM1-211ENST00000555267 554 ntTSL 27.52□□□□□ -1.214e-6■■□□□ 12.7
SND1Q7KZF4 FKBP14-204ENST00000479939 751 ntTSL 1 (best)7.12□□□□□ -1.274e-6■■□□□ 12.7
SND1Q7KZF4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.34e-6■■□□□ 12.7
SND1Q7KZF4 CALM1-204ENST00000553422 438 ntTSL 36.92□□□□□ -1.34e-6■■□□□ 12.7
SND1Q7KZF4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.67□□□□□ -1.344e-6■■□□□ 12.7
SND1Q7KZF4 CALM1-209ENST00000554296 531 ntTSL 26.37□□□□□ -1.394e-6■■□□□ 12.7
SND1Q7KZF4 USP39-213ENST00000467885 338 ntTSL 56.16□□□□□ -1.424e-6■■□□□ 12.7
SND1Q7KZF4 STAT1-206ENST00000423282 477 ntTSL 35.7□□□□□ -1.54e-6■■□□□ 12.7
SND1Q7KZF4 CD84-202ENST00000360056 1298 ntTSL 1 (best)5.21□□□□□ -1.584e-6■■□□□ 12.7
SND1Q7KZF4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.614e-6■■□□□ 12.7
SND1Q7KZF4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.614e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.76□□□□□ -1.654e-6■■□□□ 12.7
SND1Q7KZF4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.76□□□□□ -1.654e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-214ENST00000588768 843 ntTSL 34.72□□□□□ -1.654e-6■■□□□ 12.7
SND1Q7KZF4 MFSD11-203ENST00000585584 536 ntTSL 34.57□□□□□ -1.684e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.724e-6■■□□□ 12.7
SND1Q7KZF4 HNRNPC-217ENST00000555176 531 ntTSL 53.84□□□□□ -1.794e-6■■□□□ 12.7
SND1Q7KZF4 TMCO1-209ENST00000628579 477 ntTSL 5 BASIC10.8□□□□□ -0.687e-10■■□□□ 12.7
SND1Q7KZF4 ANPEP-203ENST00000558740 573 ntTSL 214.74□□□□□ -0.058e-8■■□□□ 12.7
SND1Q7KZF4 CCT7-210ENST00000473786 811 ntTSL 510.11□□□□□ -0.791e-9■■□□□ 12.7
SND1Q7KZF4 TMEM39A-211ENST00000491685 852 ntTSL 511.37□□□□□ -0.591e-7■■□□□ 12.7
SND1Q7KZF4 COPB1-203ENST00000525214 566 ntTSL 29.74□□□□□ -0.852e-6■■□□□ 12.7
SND1Q7KZF4 VCL-204ENST00000472585 556 ntTSL 29.63□□□□□ -0.873e-6■■□□□ 12.7
SND1Q7KZF4 CLTC-205ENST00000472651 665 ntTSL 25.26□□□□□ -1.571e-10■■□□□ 12.7
SND1Q7KZF4 NEMP1-204ENST00000554340 1381 ntTSL 1 (best)21.1■□□□□ 0.976e-7■■□□□ 12.6
SND1Q7KZF4 NEMP1-202ENST00000379391 5370 ntTSL 1 (best) BASIC10.9□□□□□ -0.666e-7■■□□□ 12.6
SND1Q7KZF4 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.926e-7■■□□□ 12.6
SND1Q7KZF4 CD55-202ENST00000343420 978 ntTSL 517.45■□□□□ 0.382e-7■■□□□ 12.6
SND1Q7KZF4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.081e-68■■□□□ 12.6
SND1Q7KZF4 LAMB2-214ENST00000488638 343 ntTSL 312.3□□□□□ -0.442e-8■■□□□ 12.6
SND1Q7KZF4 PLOD3-215ENST00000487563 712 ntTSL 224.31■■□□□ 1.487e-8■■□□□ 12.6
SND1Q7KZF4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.963e-7■■□□□ 12.6
SND1Q7KZF4 AC073896.1-203ENST00000548360 512 ntTSL 420.16■□□□□ 0.823e-7■■□□□ 12.6
SND1Q7KZF4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.573e-7■■□□□ 12.6
SND1Q7KZF4 AC073896.1-202ENST00000547423 566 ntTSL 418.47■□□□□ 0.553e-7■■□□□ 12.6
SND1Q7KZF4 CNPY2-208ENST00000551286 484 ntTSL 517.68■□□□□ 0.423e-7■■□□□ 12.6
SND1Q7KZF4 CNPY2-209ENST00000551475 674 ntTSL 512.06□□□□□ -0.483e-7■■□□□ 12.6
SND1Q7KZF4 CNPY2-204ENST00000546937 984 ntTSL 27.63□□□□□ -1.193e-7■■□□□ 12.6
SND1Q7KZF4 CNPY2-212ENST00000553191 621 ntTSL 26.22□□□□□ -1.413e-7■■□□□ 12.6
SND1Q7KZF4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.49■□□□□ 0.714e-8■■□□□ 12.6
SND1Q7KZF4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.714e-8■■□□□ 12.6
SND1Q7KZF4 NME1-206ENST00000475573 781 ntTSL 315.82■□□□□ 0.124e-8■■□□□ 12.6
SND1Q7KZF4 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.24■□□□□ 0.034e-8■■□□□ 12.6
SND1Q7KZF4 NME1-201ENST00000013034 796 ntTSL 3 BASIC11.56□□□□□ -0.564e-8■■□□□ 12.6
SND1Q7KZF4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.642e-8■■□□□ 12.6
SND1Q7KZF4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.112e-8■■□□□ 12.6
SND1Q7KZF4 GNG5-203ENST00000487806 557 ntTSL 39.48□□□□□ -0.892e-8■■□□□ 12.6
SND1Q7KZF4 LDHAP7-201ENST00000398295 965 ntBASIC10.23□□□□□ -0.772e-11■■□□□ 12.6
SND1Q7KZF4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.82■□□□□ 0.286e-7■■□□□ 12.6
SND1Q7KZF4 MARS-204ENST00000545888 2979 ntTSL 516.54■□□□□ 0.246e-7■■□□□ 12.6
SND1Q7KZF4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.176e-7■■□□□ 12.6
SND1Q7KZF4 MARS-203ENST00000537638 3592 ntTSL 215.28■□□□□ 0.046e-7■■□□□ 12.6
SND1Q7KZF4 G3BP1-212ENST00000522761 1763 ntTSL 217.9■□□□□ 0.464e-8■■□□□ 12.6
SND1Q7KZF4 G3BP1-208ENST00000520177 2700 ntTSL 1 (best)16.68■□□□□ 0.264e-8■■□□□ 12.6
SND1Q7KZF4 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.284e-8■■□□□ 12.6
SND1Q7KZF4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.44e-8■■□□□ 12.6
SND1Q7KZF4 RRBP1-209ENST00000495501 832 ntTSL 520.82■□□□□ 0.921e-9■■□□□ 12.6
SND1Q7KZF4 TMED10-207ENST00000622441 612 nt21.59■■□□□ 1.052e-12■■□□□ 12.6
SND1Q7KZF4 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.152e-6■■□□□ 12.6
SND1Q7KZF4 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.118e-8■■□□□ 12.6
SND1Q7KZF4 PARP1-207ENST00000490921 3165 ntTSL 210.18□□□□□ -0.788e-8■■□□□ 12.6
SND1Q7KZF4 MAGED1-206ENST00000473931 950 ntTSL 28.47□□□□□ -1.052e-6■■□□□ 12.6
SND1Q7KZF4 TMEM165-203ENST00000506103 572 ntTSL 312.17□□□□□ -0.462e-7■■□□□ 12.6
SND1Q7KZF4 TMEM165-212ENST00000608091 1567 ntTSL 311.25□□□□□ -0.612e-7■■□□□ 12.6
SND1Q7KZF4 TMEM165-211ENST00000515591 1786 ntTSL 26.92□□□□□ -1.32e-7■■□□□ 12.6
SND1Q7KZF4 TMEM165-207ENST00000509575 570 ntTSL 26.69□□□□□ -1.342e-7■■□□□ 12.6
SND1Q7KZF4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.08■□□□□ 0.321e-8■■□□□ 12.6
SND1Q7KZF4 SPCS1-204ENST00000474945 981 ntTSL 214.08□□□□□ -0.161e-8■■□□□ 12.6
SND1Q7KZF4 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC13.78□□□□□ -0.21e-8■■□□□ 12.6
SND1Q7KZF4 SPCS1-205ENST00000602728 832 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.781e-8■■□□□ 12.6
SND1Q7KZF4 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC9.13□□□□□ -0.951e-8■■□□□ 12.6
SND1Q7KZF4 TMEM59L-204ENST00000598660 1683 ntTSL 522.74■■□□□ 1.232e-6■■□□□ 12.6
SND1Q7KZF4 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.85■■□□□ 1.092e-8■■□□□ 12.6
SND1Q7KZF4 GPAA1-211ENST00000529503 878 ntTSL 521.27■■□□□ 15e-8■■□□□ 12.6
SND1Q7KZF4 GPAA1-210ENST00000528073 986 ntTSL 320.69■□□□□ 0.95e-8■■□□□ 12.6
SND1Q7KZF4 GPAA1-217ENST00000532758 1079 ntTSL 320.23■□□□□ 0.835e-8■■□□□ 12.6
SND1Q7KZF4 GPAA1-204ENST00000525087 937 ntTSL 520.23■□□□□ 0.835e-8■■□□□ 12.6
SND1Q7KZF4 GPAA1-214ENST00000530633 835 ntTSL 320.2■□□□□ 0.825e-8■■□□□ 12.6
SND1Q7KZF4 SREBF1-220ENST00000581707 695 ntTSL 220.15■□□□□ 0.826e-14■■□□□ 12.6
SND1Q7KZF4 SLC38A10-203ENST00000539643 1988 ntTSL 1 (best)19.6■□□□□ 0.735e-7■■□□□ 12.6
SND1Q7KZF4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.72e-8■■□□□ 12.6
SND1Q7KZF4 BUD23-206ENST00000430270 1260 ntTSL 519.36■□□□□ 0.692e-8■■□□□ 12.6
Retrieved 100 of 13,567 protein–RNA pairs in 90.7 ms