RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
SPCS1-205ENST00000602728 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
SPCS1-205ENST00000602728 NISCHQ9Y2I1 1504 aa24.82■■□□□ 1.56
SPCS1-205ENST00000602728 SENP3Q9H4L4 574 aaPredicted RBP24.35■■□□□ 1.49
SPCS1-205ENST00000602728 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
SPCS1-205ENST00000602728 FOXD1Q16676 465 aa22.72■■□□□ 1.23
SPCS1-205ENST00000602728 CCDC180Q9P1Z9 1646 aa22.31■■□□□ 1.16
SPCS1-205ENST00000602728 ABCC9O60706 1549 aa22.01■■□□□ 1.11
SPCS1-205ENST00000602728 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
SPCS1-205ENST00000602728 MSH5O43196 834 aa21.25■□□□□ 0.99
SPCS1-205ENST00000602728 PIAS4Q8N2W9 510 aaPredicted RBP21.24■□□□□ 0.99
SPCS1-205ENST00000602728 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
SPCS1-205ENST00000602728 ADRA2BP18089 450 aa21.19■□□□□ 0.98
SPCS1-205ENST00000602728 RB1CC1Q8TDY2 1594 aa21.02■□□□□ 0.96
SPCS1-205ENST00000602728 NACADO15069 1562 aa20.9■□□□□ 0.94
SPCS1-205ENST00000602728 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
SPCS1-205ENST00000602728 POTEDQ86YR6 584 aa20.79■□□□□ 0.92
SPCS1-205ENST00000602728 DCAF8L2P0C7V8 631 aa20.69■□□□□ 0.9
SPCS1-205ENST00000602728 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
SPCS1-205ENST00000602728 MYO15BQ96JP2 1530 aa20.63■□□□□ 0.89
SPCS1-205ENST00000602728 BICRAQ9NZM4 1560 aa20.49■□□□□ 0.87
SPCS1-205ENST00000602728 DCAF1Q9Y4B6 1507 aa20.48■□□□□ 0.87
SPCS1-205ENST00000602728 PABPN1Q86U42 306 aaKnown RBP eCLIP20.41■□□□□ 0.86
SPCS1-205ENST00000602728 SCRIBQ14160 1630 aa20.38■□□□□ 0.85
SPCS1-205ENST00000602728 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
SPCS1-205ENST00000602728 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
SPCS1-205ENST00000602728 CC2D2AQ9P2K1 1620 aa19.94■□□□□ 0.78
SPCS1-205ENST00000602728 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
SPCS1-205ENST00000602728 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
SPCS1-205ENST00000602728 MAPK8IP2Q13387 824 aaPredicted RBP19.48■□□□□ 0.71
SPCS1-205ENST00000602728 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
SPCS1-205ENST00000602728 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
SPCS1-205ENST00000602728 DMRT2Q9Y5R5 561 aa19.31■□□□□ 0.68
SPCS1-205ENST00000602728 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
SPCS1-205ENST00000602728 BAZ1AQ9NRL2 1556 aaPredicted RBP19.26■□□□□ 0.67
SPCS1-205ENST00000602728 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
SPCS1-205ENST00000602728 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
SPCS1-205ENST00000602728 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
SPCS1-205ENST00000602728 MROH2BQ7Z745 1585 aa19.19■□□□□ 0.66
SPCS1-205ENST00000602728 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
SPCS1-205ENST00000602728 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
SPCS1-205ENST00000602728 WIZO95785 1651 aa19.04■□□□□ 0.64
SPCS1-205ENST00000602728 NESP48681 1621 aa19■□□□□ 0.63
SPCS1-205ENST00000602728 PPP4R3CPQ6ZMV5 832 aa19■□□□□ 0.63
SPCS1-205ENST00000602728 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
SPCS1-205ENST00000602728 KIF21AQ7Z4S6 1674 aa18.89■□□□□ 0.61
SPCS1-205ENST00000602728 THOC2Q8NI27 1593 aaKnown RBP18.85■□□□□ 0.61
SPCS1-205ENST00000602728 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
SPCS1-205ENST00000602728 CUX2O14529 1486 aa18.81■□□□□ 0.6
SPCS1-205ENST00000602728 RSF1Q96T23 1441 aaPredicted RBP18.77■□□□□ 0.6
SPCS1-205ENST00000602728 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
SPCS1-205ENST00000602728 PRDM2Q13029 1718 aa18.63■□□□□ 0.57
SPCS1-205ENST00000602728 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
SPCS1-205ENST00000602728 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
SPCS1-205ENST00000602728 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
SPCS1-205ENST00000602728 DCAF8L1A6NGE4 600 aa18.59■□□□□ 0.57
SPCS1-205ENST00000602728 HOXD11P31277 338 aaPredicted RBP18.58■□□□□ 0.56
SPCS1-205ENST00000602728 WDR62O43379 1518 aa18.55■□□□□ 0.56
SPCS1-205ENST00000602728 MRC2Q9UBG0 1479 aa18.55■□□□□ 0.56
SPCS1-205ENST00000602728 CEP164Q9UPV0 1460 aa18.53■□□□□ 0.56
SPCS1-205ENST00000602728 CFTRP13569 1480 aa18.52■□□□□ 0.55
SPCS1-205ENST00000602728 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
SPCS1-205ENST00000602728 CCDC88BA6NC98 1476 aa18.46■□□□□ 0.54
SPCS1-205ENST00000602728 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
SPCS1-205ENST00000602728 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
SPCS1-205ENST00000602728 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
SPCS1-205ENST00000602728 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
SPCS1-205ENST00000602728 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
SPCS1-205ENST00000602728 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
SPCS1-205ENST00000602728 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
SPCS1-205ENST00000602728 EIF4G3O43432 1585 aaKnown RBP18.14■□□□□ 0.49
SPCS1-205ENST00000602728 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
SPCS1-205ENST00000602728 RNF39Q9H2S5 420 aa18.13■□□□□ 0.49
SPCS1-205ENST00000602728 TARBP1Q13395 1621 aaKnown RBP18.1■□□□□ 0.49
SPCS1-205ENST00000602728 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
SPCS1-205ENST00000602728 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
SPCS1-205ENST00000602728 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
SPCS1-205ENST00000602728 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
SPCS1-205ENST00000602728 CHD1O14646 1710 aa18.03■□□□□ 0.48
SPCS1-205ENST00000602728 CUX1P39880 1505 aa18.03■□□□□ 0.48
SPCS1-205ENST00000602728 WDR97A6NE52 1622 aa18.01■□□□□ 0.47
SPCS1-205ENST00000602728 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
SPCS1-205ENST00000602728 FGD5Q6ZNL6 1462 aa17.98■□□□□ 0.47
SPCS1-205ENST00000602728 RAD54L2Q9Y4B4 1467 aa17.97■□□□□ 0.47
SPCS1-205ENST00000602728 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
SPCS1-205ENST00000602728 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
SPCS1-205ENST00000602728 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
SPCS1-205ENST00000602728 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
SPCS1-205ENST00000602728 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
SPCS1-205ENST00000602728 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
SPCS1-205ENST00000602728 SOGA1O94964 1423 aa17.86■□□□□ 0.45
SPCS1-205ENST00000602728 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
SPCS1-205ENST00000602728 SYNJ1O43426 1573 aa17.84■□□□□ 0.45
SPCS1-205ENST00000602728 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.44
SPCS1-205ENST00000602728 SNAPC4Q5SXM2 1469 aa17.82■□□□□ 0.44
SPCS1-205ENST00000602728 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
SPCS1-205ENST00000602728 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
SPCS1-205ENST00000602728 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
SPCS1-205ENST00000602728 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
SPCS1-205ENST00000602728 ARHGEF11O15085 1522 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms