RNA–Protein interactions for RNA: ENST00000553422.1

CALM1-204, Transcript of calmodulin 1, humanhuman

TSL 3

Gene CALM1, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM1-204ENST00000553422 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
CALM1-204ENST00000553422 CHIC1Q5VXU3 224 aa27.96■■■□□ 2.07
CALM1-204ENST00000553422 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
CALM1-204ENST00000553422 PHF23Q9BUL5 403 aaPredicted RBP24.85■■□□□ 1.57
CALM1-204ENST00000553422 FOXD1Q16676 465 aa23.47■■□□□ 1.35
CALM1-204ENST00000553422 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.17
CALM1-204ENST00000553422 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
CALM1-204ENST00000553422 PIAS4Q8N2W9 510 aaPredicted RBP21.94■■□□□ 1.1
CALM1-204ENST00000553422 MSH5O43196 834 aa21.92■■□□□ 1.1
CALM1-204ENST00000553422 ADRA2BP18089 450 aa21.9■■□□□ 1.1
CALM1-204ENST00000553422 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
CALM1-204ENST00000553422 MAPK8IP2Q13387 824 aaPredicted RBP20.15■□□□□ 0.82
CALM1-204ENST00000553422 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
CALM1-204ENST00000553422 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
CALM1-204ENST00000553422 PPP4R3CPQ6ZMV5 832 aa19.61■□□□□ 0.73
CALM1-204ENST00000553422 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
CALM1-204ENST00000553422 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
CALM1-204ENST00000553422 HOXD11P31277 338 aaPredicted RBP19.16■□□□□ 0.66
CALM1-204ENST00000553422 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
CALM1-204ENST00000553422 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
CALM1-204ENST00000553422 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
CALM1-204ENST00000553422 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
CALM1-204ENST00000553422 NPM3O75607 178 aaKnown RBP18.57■□□□□ 0.56
CALM1-204ENST00000553422 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
CALM1-204ENST00000553422 DNAJC5BQ9UF47 199 aa18.42■□□□□ 0.54
CALM1-204ENST00000553422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.531e-8■■■□□ 16.3
CALM1-204ENST00000553422 KCNA4P22459 653 aa18.22■□□□□ 0.51
CALM1-204ENST00000553422 U3KPZ7 1027 aaPredicted RBP17.93■□□□□ 0.46
CALM1-204ENST00000553422 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
CALM1-204ENST00000553422 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
CALM1-204ENST00000553422 CAPN15O75808 1086 aa17.69■□□□□ 0.42
CALM1-204ENST00000553422 DSG3P32926 999 aa17.54■□□□□ 0.4
CALM1-204ENST00000553422 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
CALM1-204ENST00000553422 APLP2Q06481 763 aa17.37■□□□□ 0.37
CALM1-204ENST00000553422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
CALM1-204ENST00000553422 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
CALM1-204ENST00000553422 ABCB7O75027 752 aa17.3■□□□□ 0.36
CALM1-204ENST00000553422 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
CALM1-204ENST00000553422 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
CALM1-204ENST00000553422 SLC4A1APQ9BWU0 796 aaKnown RBP17.19■□□□□ 0.34
CALM1-204ENST00000553422 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
CALM1-204ENST00000553422 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.31
CALM1-204ENST00000553422 POLA2Q14181 598 aa16.92■□□□□ 0.3
CALM1-204ENST00000553422 POTEHQ6S545 545 aa16.84■□□□□ 0.29
CALM1-204ENST00000553422 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
CALM1-204ENST00000553422 ZBTB22O15209 634 aa16.75■□□□□ 0.27
CALM1-204ENST00000553422 RBM42Q9BTD8 480 aaKnown RBP16.7■□□□□ 0.26
CALM1-204ENST00000553422 ZBTB12Q9Y330 459 aaPredicted RBP16.49■□□□□ 0.23
CALM1-204ENST00000553422 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
CALM1-204ENST00000553422 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
CALM1-204ENST00000553422 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
CALM1-204ENST00000553422 AKT1S1Q96B36 256 aa16.32■□□□□ 0.2
CALM1-204ENST00000553422 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
CALM1-204ENST00000553422 FBLN2P98095 1184 aa16.13■□□□□ 0.17
CALM1-204ENST00000553422 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
CALM1-204ENST00000553422 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
CALM1-204ENST00000553422 PIP4P2Q8N4L2 257 aa16.01■□□□□ 0.15
CALM1-204ENST00000553422 SPDYE2BA6NHP3 402 aa15.99■□□□□ 0.15
CALM1-204ENST00000553422 SPDYE6P0CI01 402 aa15.99■□□□□ 0.15
CALM1-204ENST00000553422 SPDYE2Q495Y8 402 aa15.99■□□□□ 0.15
CALM1-204ENST00000553422 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
CALM1-204ENST00000553422 FXR2P51116 673 aaKnown RBP eCLIP15.87■□□□□ 0.13
CALM1-204ENST00000553422 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
CALM1-204ENST00000553422 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
CALM1-204ENST00000553422 CLEC11AQ9Y240 323 aa15.8■□□□□ 0.12
CALM1-204ENST00000553422 SSUH2Q9Y2M2 353 aa15.77■□□□□ 0.12
CALM1-204ENST00000553422 HAX1O00165 279 aa15.76■□□□□ 0.11
CALM1-204ENST00000553422 SP7Q8TDD2 431 aaPredicted RBP15.76■□□□□ 0.11
CALM1-204ENST00000553422 SPDYE1Q8NFV5 336 aaPredicted RBP15.74■□□□□ 0.11
CALM1-204ENST00000553422 PRKAR2AP13861 404 aaKnown RBP15.64■□□□□ 0.09
CALM1-204ENST00000553422 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
CALM1-204ENST00000553422 EVX2Q03828 476 aa15.56■□□□□ 0.08
CALM1-204ENST00000553422 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
CALM1-204ENST00000553422 PRR29P0C7W0 189 aa15.49■□□□□ 0.07
CALM1-204ENST00000553422 C19orf67A6NJJ6 358 aa15.37■□□□□ 0.05
CALM1-204ENST00000553422 SPDYE4A6NLX3 237 aa15.26■□□□□ 0.03
CALM1-204ENST00000553422 FARP1Q9Y4F1 1045 aaPredicted RBP15.21■□□□□ 0.03
CALM1-204ENST00000553422 GABBR2O75899 941 aa15.18■□□□□ 0.02
CALM1-204ENST00000553422 CD44P16070 742 aaKnown RBP15.14■□□□□ 0.01
CALM1-204ENST00000553422 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
CALM1-204ENST00000553422 CREBZFQ9NS37 354 aa15.09■□□□□ 0.01
CALM1-204ENST00000553422 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
CALM1-204ENST00000553422 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
CALM1-204ENST00000553422 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
CALM1-204ENST00000553422 CLCN6P51797 869 aa14.81□□□□□ -0.04
CALM1-204ENST00000553422 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
CALM1-204ENST00000553422 LHX8Q68G74 356 aa14.8□□□□□ -0.04
CALM1-204ENST00000553422 PROM2Q8N271 834 aa14.8□□□□□ -0.04
CALM1-204ENST00000553422 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
CALM1-204ENST00000553422 PAK3O75914 559 aaPredicted RBP14.78□□□□□ -0.04
CALM1-204ENST00000553422 DCBLD2Q96PD2 775 aa14.78□□□□□ -0.04
CALM1-204ENST00000553422 GALR2O43603 387 aaPredicted RBP14.74□□□□□ -0.05
CALM1-204ENST00000553422 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
CALM1-204ENST00000553422 MIER1Q8N108 512 aa14.59□□□□□ -0.07
CALM1-204ENST00000553422 TSPYL2Q9H2G4 693 aaPredicted RBP14.59□□□□□ -0.07
CALM1-204ENST00000553422 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
CALM1-204ENST00000553422 MS4A3Q96HJ5 214 aa14.52□□□□□ -0.09
CALM1-204ENST00000553422 FKBP8Q14318 412 aa14.51□□□□□ -0.09
CALM1-204ENST00000553422 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
CALM1-204ENST00000553422 PLCD3Q8N3E9 789 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms