RNA–Protein interactions for RNA: ENST00000490921.5

PARP1-207, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 3,165 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-207ENST00000490921 NISCHQ9Y2I1 1504 aa19.09■□□□□ 0.65
PARP1-207ENST00000490921 CCDC180Q9P1Z9 1646 aa16.78■□□□□ 0.28
PARP1-207ENST00000490921 ZCCHC6Q5VYS8 1495 aaKnown RBP16.09■□□□□ 0.17
PARP1-207ENST00000490921 DCAF1Q9Y4B6 1507 aa16■□□□□ 0.15
PARP1-207ENST00000490921 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
PARP1-207ENST00000490921 AEBP2Q6ZN18 517 aaPredicted RBP15.74■□□□□ 0.11
PARP1-207ENST00000490921 NACADO15069 1562 aa15.57■□□□□ 0.08
PARP1-207ENST00000490921 ABCC9O60706 1549 aa15.43■□□□□ 0.06
PARP1-207ENST00000490921 RB1CC1Q8TDY2 1594 aa15.36■□□□□ 0.05
PARP1-207ENST00000490921 SHROOM4Q9ULL8 1493 aa15.34■□□□□ 0.05
PARP1-207ENST00000490921 HRCP23327 699 aa15.33■□□□□ 0.04
PARP1-207ENST00000490921 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
PARP1-207ENST00000490921 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
PARP1-207ENST00000490921 SUPT5HO00267 1087 aaKnown RBP15.24■□□□□ 0.03
PARP1-207ENST00000490921 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
PARP1-207ENST00000490921 PCGF6Q9BYE7 350 aa15.01□□□□□ -0.01
PARP1-207ENST00000490921 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
PARP1-207ENST00000490921 PPARGC1BQ86YN6 1023 aaKnown RBP14.95□□□□□ -0.02
PARP1-207ENST00000490921 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
PARP1-207ENST00000490921 BAZ1AQ9NRL2 1556 aaPredicted RBP14.77□□□□□ -0.05
PARP1-207ENST00000490921 RSF1Q96T23 1441 aaPredicted RBP14.76□□□□□ -0.05
PARP1-207ENST00000490921 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
PARP1-207ENST00000490921 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
PARP1-207ENST00000490921 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
PARP1-207ENST00000490921 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
PARP1-207ENST00000490921 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
PARP1-207ENST00000490921 TRIM26Q12899 539 aaPredicted RBP14.62□□□□□ -0.07
PARP1-207ENST00000490921 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
PARP1-207ENST00000490921 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
PARP1-207ENST00000490921 WIZO95785 1651 aa14.5□□□□□ -0.09
PARP1-207ENST00000490921 ZEB1P37275 1124 aaPredicted RBP14.47□□□□□ -0.09
PARP1-207ENST00000490921 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
PARP1-207ENST00000490921 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
PARP1-207ENST00000490921 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
PARP1-207ENST00000490921 ATAD2BQ9ULI0 1458 aa14.38□□□□□ -0.11
PARP1-207ENST00000490921 EIF4G1Q04637 1599 aaKnown RBP14.38□□□□□ -0.11
PARP1-207ENST00000490921 HMGXB3Q12766 1538 aa14.36□□□□□ -0.11
PARP1-207ENST00000490921 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
PARP1-207ENST00000490921 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
PARP1-207ENST00000490921 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
PARP1-207ENST00000490921 MYT1Q01538 1121 aa14.17□□□□□ -0.14
PARP1-207ENST00000490921 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
PARP1-207ENST00000490921 CC2D2AQ9P2K1 1620 aa14.11□□□□□ -0.15
PARP1-207ENST00000490921 ACIN1Q9UKV3 1341 aaKnown RBP14.11□□□□□ -0.15
PARP1-207ENST00000490921 FAM9AQ8IZU1 332 aaPredicted RBP14.06□□□□□ -0.16
PARP1-207ENST00000490921 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
PARP1-207ENST00000490921 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
PARP1-207ENST00000490921 CFTRP13569 1480 aa14□□□□□ -0.17
PARP1-207ENST00000490921 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
PARP1-207ENST00000490921 GTF3C3Q9Y5Q9 886 aa13.95□□□□□ -0.18
PARP1-207ENST00000490921 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
PARP1-207ENST00000490921 CENPBP07199 599 aaPredicted RBP13.92□□□□□ -0.18
PARP1-207ENST00000490921 CCER1Q8TC90 406 aaPredicted RBP13.92□□□□□ -0.18
PARP1-207ENST00000490921 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
PARP1-207ENST00000490921 BIVM-ERCC5R4GMW8 1640 aa13.88□□□□□ -0.19
PARP1-207ENST00000490921 CADPSQ9ULU8 1353 aa13.88□□□□□ -0.19
PARP1-207ENST00000490921 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
PARP1-207ENST00000490921 EEA1Q15075 1411 aa13.87□□□□□ -0.19
PARP1-207ENST00000490921 TOP2BQ02880 1626 aa13.85□□□□□ -0.19
PARP1-207ENST00000490921 ABCC8Q09428 1581 aa13.85□□□□□ -0.19
PARP1-207ENST00000490921 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
PARP1-207ENST00000490921 PHF23Q9BUL5 403 aaPredicted RBP13.84□□□□□ -0.19
PARP1-207ENST00000490921 SYNJ1O43426 1573 aa13.81□□□□□ -0.2
PARP1-207ENST00000490921 CUX1P39880 1505 aa13.73□□□□□ -0.21
PARP1-207ENST00000490921 FANCD2Q9BXW9 1451 aa13.69□□□□□ -0.22
PARP1-207ENST00000490921 ZNF316A6NFI3 1004 aaPredicted RBP13.69□□□□□ -0.22
PARP1-207ENST00000490921 DNMBPQ6XZF7 1577 aa13.67□□□□□ -0.22
PARP1-207ENST00000490921 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
PARP1-207ENST00000490921 KIF21BO75037 1637 aa13.64□□□□□ -0.23
PARP1-207ENST00000490921 CEP162Q5TB80 1403 aa13.64□□□□□ -0.23
PARP1-207ENST00000490921 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
PARP1-207ENST00000490921 SOGA1O94964 1423 aa13.61□□□□□ -0.23
PARP1-207ENST00000490921 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
PARP1-207ENST00000490921 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
PARP1-207ENST00000490921 NESP48681 1621 aa13.58□□□□□ -0.24
PARP1-207ENST00000490921 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
PARP1-207ENST00000490921 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
PARP1-207ENST00000490921 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
PARP1-207ENST00000490921 MIER1Q8N108 512 aa13.57□□□□□ -0.24
PARP1-207ENST00000490921 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
PARP1-207ENST00000490921 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
PARP1-207ENST00000490921 GOLGA3Q08378 1498 aa13.54□□□□□ -0.24
PARP1-207ENST00000490921 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
PARP1-207ENST00000490921 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
PARP1-207ENST00000490921 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
PARP1-207ENST00000490921 PRXQ9BXM0 1461 aa13.52□□□□□ -0.24
PARP1-207ENST00000490921 WDR97A6NE52 1622 aa13.52□□□□□ -0.24
PARP1-207ENST00000490921 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
PARP1-207ENST00000490921 KIF21AQ7Z4S6 1674 aa13.52□□□□□ -0.25
PARP1-207ENST00000490921 DNAJC5BQ9UF47 199 aa13.5□□□□□ -0.25
PARP1-207ENST00000490921 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
PARP1-207ENST00000490921 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
PARP1-207ENST00000490921 WDR62O43379 1518 aa13.47□□□□□ -0.25
PARP1-207ENST00000490921 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
PARP1-207ENST00000490921 ABCA5Q8WWZ7 1642 aa13.43□□□□□ -0.26
PARP1-207ENST00000490921 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
PARP1-207ENST00000490921 CUL7Q14999 1698 aa13.42□□□□□ -0.26
PARP1-207ENST00000490921 CUX2O14529 1486 aa13.42□□□□□ -0.26
PARP1-207ENST00000490921 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
PARP1-207ENST00000490921 IGF1RP08069 1367 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms