RNA–Protein interactions for RNA: ENST00000539643.1

SLC38A10-203, Transcript of solute carrier family 38 member 10, humanhuman

TSL 1 (best)

Gene SLC38A10, Length 1,988 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A10-203ENST00000539643 NISCHQ9Y2I1 1504 aa39.89■■■■□ 3.98
SLC38A10-203ENST00000539643 CCDC180Q9P1Z9 1646 aa34.67■■■■□ 3.14
SLC38A10-203ENST00000539643 ZCCHC6Q5VYS8 1495 aaKnown RBP33.59■■■□□ 2.97
SLC38A10-203ENST00000539643 DCAF1Q9Y4B6 1507 aa33.01■■■□□ 2.87
SLC38A10-203ENST00000539643 DCAF8L2P0C7V8 631 aa32.99■■■□□ 2.87
SLC38A10-203ENST00000539643 ABCC9O60706 1549 aa32.77■■■□□ 2.84
SLC38A10-203ENST00000539643 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
SLC38A10-203ENST00000539643 MYO15BQ96JP2 1530 aa32.52■■■□□ 2.8
SLC38A10-203ENST00000539643 NACADO15069 1562 aa32.3■■■□□ 2.76
SLC38A10-203ENST00000539643 RB1CC1Q8TDY2 1594 aa32■■■□□ 2.71
SLC38A10-203ENST00000539643 SCRIBQ14160 1630 aa31.92■■■□□ 2.7
SLC38A10-203ENST00000539643 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
SLC38A10-203ENST00000539643 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
SLC38A10-203ENST00000539643 RSF1Q96T23 1441 aaPredicted RBP31.09■■■□□ 2.57
SLC38A10-203ENST00000539643 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
SLC38A10-203ENST00000539643 CECR2Q9BXF3 1484 aa30.99■■■□□ 2.55
SLC38A10-203ENST00000539643 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
SLC38A10-203ENST00000539643 MROH2BQ7Z745 1585 aa30.82■■■□□ 2.52
SLC38A10-203ENST00000539643 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
SLC38A10-203ENST00000539643 SMARCA4P51532 1647 aa30.61■■■□□ 2.49
SLC38A10-203ENST00000539643 CHIC1Q5VXU3 224 aa30.6■■■□□ 2.49
SLC38A10-203ENST00000539643 WIZO95785 1651 aa30.57■■■□□ 2.48
SLC38A10-203ENST00000539643 TOP2AP11388 1531 aaKnown RBP30.27■■■□□ 2.44
SLC38A10-203ENST00000539643 PEG3Q9GZU2 1588 aa30.23■■■□□ 2.43
SLC38A10-203ENST00000539643 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
SLC38A10-203ENST00000539643 EIF4G1Q04637 1599 aaKnown RBP30.1■■■□□ 2.41
SLC38A10-203ENST00000539643 SMARCA2P51531 1590 aa30.07■■■□□ 2.4
SLC38A10-203ENST00000539643 CCDC88BA6NC98 1476 aa29.98■■■□□ 2.39
SLC38A10-203ENST00000539643 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
SLC38A10-203ENST00000539643 NCAPD3P42695 1498 aa29.84■■■□□ 2.37
SLC38A10-203ENST00000539643 HMGXB3Q12766 1538 aa29.77■■■□□ 2.36
SLC38A10-203ENST00000539643 TRIM41Q8WV44 630 aa29.76■■■□□ 2.35
SLC38A10-203ENST00000539643 CC2D2AQ9P2K1 1620 aa29.64■■■□□ 2.33
SLC38A10-203ENST00000539643 LOC105371045A0A1W2PR82 267 aa29.55■■■□□ 2.32
SLC38A10-203ENST00000539643 ABCC8Q09428 1581 aa29.44■■■□□ 2.3
SLC38A10-203ENST00000539643 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
SLC38A10-203ENST00000539643 CFTRP13569 1480 aa29.2■■■□□ 2.27
SLC38A10-203ENST00000539643 FAM9AQ8IZU1 332 aaPredicted RBP29.19■■■□□ 2.26
SLC38A10-203ENST00000539643 PCGF6Q9BYE7 350 aa29.13■■■□□ 2.25
SLC38A10-203ENST00000539643 CADPSQ9ULU8 1353 aa29.1■■■□□ 2.25
SLC38A10-203ENST00000539643 SYNJ1O43426 1573 aa29.1■■■□□ 2.25
SLC38A10-203ENST00000539643 EEA1Q15075 1411 aa29.01■■■□□ 2.24
SLC38A10-203ENST00000539643 PRDM2Q13029 1718 aa28.99■■■□□ 2.23
SLC38A10-203ENST00000539643 SOGA1O94964 1423 aa28.99■■■□□ 2.23
SLC38A10-203ENST00000539643 TOP2BQ02880 1626 aa28.96■■■□□ 2.23
SLC38A10-203ENST00000539643 DNAJC5BQ9UF47 199 aa28.95■■■□□ 2.22
SLC38A10-203ENST00000539643 HRCP23327 699 aa28.93■■■□□ 2.22
SLC38A10-203ENST00000539643 BIVM-ERCC5R4GMW8 1640 aa28.92■■■□□ 2.22
SLC38A10-203ENST00000539643 RUSC2Q8N2Y8 1516 aa28.86■■■□□ 2.21
SLC38A10-203ENST00000539643 NESP48681 1621 aa28.81■■■□□ 2.2
SLC38A10-203ENST00000539643 TRIM26Q12899 539 aaPredicted RBP28.81■■■□□ 2.2
SLC38A10-203ENST00000539643 CSRNP3Q8WYN3 585 aa28.81■■■□□ 2.2
SLC38A10-203ENST00000539643 EHMT2Q96KQ7 1210 aa28.81■■■□□ 2.2
SLC38A10-203ENST00000539643 CUX1P39880 1505 aa28.8■■■□□ 2.2
SLC38A10-203ENST00000539643 LAMC3Q9Y6N6 1575 aa28.79■■■□□ 2.2
SLC38A10-203ENST00000539643 FANCD2Q9BXW9 1451 aa28.76■■■□□ 2.19
SLC38A10-203ENST00000539643 TNIKQ9UKE5 1360 aa28.61■■■□□ 2.17
SLC38A10-203ENST00000539643 KIF21BO75037 1637 aa28.61■■■□□ 2.17
SLC38A10-203ENST00000539643 GOLGA3Q08378 1498 aa28.61■■■□□ 2.17
SLC38A10-203ENST00000539643 PDS5BQ9NTI5 1447 aa28.59■■■□□ 2.17
SLC38A10-203ENST00000539643 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.17
SLC38A10-203ENST00000539643 DNMBPQ6XZF7 1577 aa28.49■■■□□ 2.15
SLC38A10-203ENST00000539643 CEP162Q5TB80 1403 aa28.47■■■□□ 2.15
SLC38A10-203ENST00000539643 FGD5Q6ZNL6 1462 aa28.47■■■□□ 2.15
SLC38A10-203ENST00000539643 TOPBP1Q92547 1522 aa28.45■■■□□ 2.14
SLC38A10-203ENST00000539643 KIF27Q86VH2 1401 aa28.45■■■□□ 2.14
SLC38A10-203ENST00000539643 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
SLC38A10-203ENST00000539643 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
SLC38A10-203ENST00000539643 PRXQ9BXM0 1461 aa28.39■■■□□ 2.14
SLC38A10-203ENST00000539643 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
SLC38A10-203ENST00000539643 RAPGEF2Q9Y4G8 1499 aa28.38■■■□□ 2.13
SLC38A10-203ENST00000539643 ERICH3Q5RHP9 1530 aa28.37■■■□□ 2.13
SLC38A10-203ENST00000539643 POLA1P09884 1462 aaPredicted RBP28.33■■■□□ 2.13
SLC38A10-203ENST00000539643 CUX2O14529 1486 aa28.31■■■□□ 2.12
SLC38A10-203ENST00000539643 RAD54L2Q9Y4B4 1467 aa28.25■■■□□ 2.11
SLC38A10-203ENST00000539643 PPARGC1BQ86YN6 1023 aaKnown RBP28.24■■■□□ 2.11
SLC38A10-203ENST00000539643 ABCA10Q8WWZ4 1543 aa28.22■■■□□ 2.11
SLC38A10-203ENST00000539643 IGF1RP08069 1367 aa28.19■■■□□ 2.1
SLC38A10-203ENST00000539643 MRC2Q9UBG0 1479 aa28.19■■■□□ 2.1
SLC38A10-203ENST00000539643 CLIP1P30622 1438 aa28.16■■■□□ 2.1
SLC38A10-203ENST00000539643 WDR97A6NE52 1622 aa28.08■■■□□ 2.09
SLC38A10-203ENST00000539643 ERCC6Q03468 1493 aa28.07■■■□□ 2.08
SLC38A10-203ENST00000539643 ZEB1P37275 1124 aaPredicted RBP28.06■■■□□ 2.08
SLC38A10-203ENST00000539643 WDR62O43379 1518 aa28.03■■■□□ 2.08
SLC38A10-203ENST00000539643 CARMIL1Q5VZK9 1371 aa28.03■■■□□ 2.08
SLC38A10-203ENST00000539643 TARBP1Q13395 1621 aaKnown RBP28.01■■■□□ 2.07
SLC38A10-203ENST00000539643 VPS8Q8N3P4 1428 aa27.99■■■□□ 2.07
SLC38A10-203ENST00000539643 TDRD9Q8NDG6 1382 aaKnown RBP27.99■■■□□ 2.07
SLC38A10-203ENST00000539643 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
SLC38A10-203ENST00000539643 GAPVD1Q14C86 1478 aa27.93■■■□□ 2.06
SLC38A10-203ENST00000539643 THOC2Q8NI27 1593 aaKnown RBP27.91■■■□□ 2.06
SLC38A10-203ENST00000539643 CUL7Q14999 1698 aa27.91■■■□□ 2.06
SLC38A10-203ENST00000539643 IFT140Q96RY7 1462 aa27.87■■■□□ 2.05
SLC38A10-203ENST00000539643 ARAP1Q96P48 1450 aa27.86■■■□□ 2.05
SLC38A10-203ENST00000539643 RANGAP1P46060 587 aaPredicted RBP27.82■■■□□ 2.04
SLC38A10-203ENST00000539643 TTBK1Q5TCY1 1321 aaPredicted RBP27.81■■■□□ 2.04
SLC38A10-203ENST00000539643 ARHGAP35Q9NRY4 1499 aa27.8■■■□□ 2.04
SLC38A10-203ENST00000539643 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.04
SLC38A10-203ENST00000539643 ZNF608Q9ULD9 1512 aaPredicted RBP27.73■■■□□ 2.03
SLC38A10-203ENST00000539643 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms