RNA–Protein interactions for RNA: ENST00000488638.1

LAMB2-214, Transcript of laminin subunit beta 2, humanhuman

TSL 3

Gene LAMB2, Length 343 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB2-214ENST00000488638 NISCHQ9Y2I1 1504 aa28.32■■■□□ 2.12
LAMB2-214ENST00000488638 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
LAMB2-214ENST00000488638 ABCC9O60706 1549 aa24.25■■□□□ 1.47
LAMB2-214ENST00000488638 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
LAMB2-214ENST00000488638 MYO15BQ96JP2 1530 aa23.59■■□□□ 1.37
LAMB2-214ENST00000488638 NACADO15069 1562 aa23.57■■□□□ 1.36
LAMB2-214ENST00000488638 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
LAMB2-214ENST00000488638 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
LAMB2-214ENST00000488638 DCAF8L2P0C7V8 631 aa23.5■■□□□ 1.35
LAMB2-214ENST00000488638 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
LAMB2-214ENST00000488638 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
LAMB2-214ENST00000488638 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
LAMB2-214ENST00000488638 PABPN1Q86U42 306 aaKnown RBP eCLIP22.7■■□□□ 1.22
LAMB2-214ENST00000488638 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
LAMB2-214ENST00000488638 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
LAMB2-214ENST00000488638 DNAJC5BQ9UF47 199 aa22.11■■□□□ 1.13
LAMB2-214ENST00000488638 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
LAMB2-214ENST00000488638 CECR2Q9BXF3 1484 aa21.97■■□□□ 1.11
LAMB2-214ENST00000488638 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
LAMB2-214ENST00000488638 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
LAMB2-214ENST00000488638 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
LAMB2-214ENST00000488638 MROH2BQ7Z745 1585 aa21.77■■□□□ 1.08
LAMB2-214ENST00000488638 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
LAMB2-214ENST00000488638 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
LAMB2-214ENST00000488638 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
LAMB2-214ENST00000488638 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
LAMB2-214ENST00000488638 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
LAMB2-214ENST00000488638 BAZ1BQ9UIG0 1483 aaKnown RBP21.57■■□□□ 1.04
LAMB2-214ENST00000488638 WIZO95785 1651 aa21.51■■□□□ 1.03
LAMB2-214ENST00000488638 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
LAMB2-214ENST00000488638 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
LAMB2-214ENST00000488638 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
LAMB2-214ENST00000488638 LAMC3Q9Y6N6 1575 aa21.13■□□□□ 0.97
LAMB2-214ENST00000488638 CCDC88BA6NC98 1476 aa21.11■□□□□ 0.97
LAMB2-214ENST00000488638 CFTRP13569 1480 aa21.04■□□□□ 0.96
LAMB2-214ENST00000488638 NESP48681 1621 aa21.04■□□□□ 0.96
LAMB2-214ENST00000488638 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
LAMB2-214ENST00000488638 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
LAMB2-214ENST00000488638 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
LAMB2-214ENST00000488638 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
LAMB2-214ENST00000488638 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
LAMB2-214ENST00000488638 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
LAMB2-214ENST00000488638 MRC2Q9UBG0 1479 aa20.72■□□□□ 0.91
LAMB2-214ENST00000488638 CUX2O14529 1486 aa20.71■□□□□ 0.91
LAMB2-214ENST00000488638 THOC2Q8NI27 1593 aaKnown RBP20.7■□□□□ 0.9
LAMB2-214ENST00000488638 ABCC8Q09428 1581 aa20.64■□□□□ 0.9
LAMB2-214ENST00000488638 WDR62O43379 1518 aa20.64■□□□□ 0.9
LAMB2-214ENST00000488638 URB2Q14146 1524 aaKnown RBP20.58■□□□□ 0.88
LAMB2-214ENST00000488638 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
LAMB2-214ENST00000488638 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
LAMB2-214ENST00000488638 CUX1P39880 1505 aa20.4■□□□□ 0.86
LAMB2-214ENST00000488638 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
LAMB2-214ENST00000488638 IFT140Q96RY7 1462 aa20.38■□□□□ 0.85
LAMB2-214ENST00000488638 POLA1P09884 1462 aaPredicted RBP20.35■□□□□ 0.85
LAMB2-214ENST00000488638 TOP2BQ02880 1626 aa20.33■□□□□ 0.84
LAMB2-214ENST00000488638 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
LAMB2-214ENST00000488638 FGD5Q6ZNL6 1462 aa20.31■□□□□ 0.84
LAMB2-214ENST00000488638 SOGA1O94964 1423 aa20.31■□□□□ 0.84
LAMB2-214ENST00000488638 TARBP1Q13395 1621 aaKnown RBP20.27■□□□□ 0.83
LAMB2-214ENST00000488638 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
LAMB2-214ENST00000488638 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
LAMB2-214ENST00000488638 RAD54L2Q9Y4B4 1467 aa20.22■□□□□ 0.83
LAMB2-214ENST00000488638 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
LAMB2-214ENST00000488638 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
LAMB2-214ENST00000488638 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
LAMB2-214ENST00000488638 TDRD9Q8NDG6 1382 aaKnown RBP20.11■□□□□ 0.81
LAMB2-214ENST00000488638 EIF4G3O43432 1585 aaKnown RBP20.1■□□□□ 0.81
LAMB2-214ENST00000488638 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
LAMB2-214ENST00000488638 GAPVD1Q14C86 1478 aa20.06■□□□□ 0.8
LAMB2-214ENST00000488638 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
LAMB2-214ENST00000488638 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
LAMB2-214ENST00000488638 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
LAMB2-214ENST00000488638 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
LAMB2-214ENST00000488638 ERICH3Q5RHP9 1530 aa19.96■□□□□ 0.79
LAMB2-214ENST00000488638 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
LAMB2-214ENST00000488638 PBRM1Q86U86 1689 aa19.93■□□□□ 0.78
LAMB2-214ENST00000488638 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
LAMB2-214ENST00000488638 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
LAMB2-214ENST00000488638 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
LAMB2-214ENST00000488638 IGF1RP08069 1367 aa19.88■□□□□ 0.77
LAMB2-214ENST00000488638 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
LAMB2-214ENST00000488638 FHAD1B1AJZ9 1412 aa19.86■□□□□ 0.77
LAMB2-214ENST00000488638 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
LAMB2-214ENST00000488638 FBLN2P98095 1184 aa19.82■□□□□ 0.76
LAMB2-214ENST00000488638 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
LAMB2-214ENST00000488638 EEA1Q15075 1411 aa19.79■□□□□ 0.76
LAMB2-214ENST00000488638 CUL7Q14999 1698 aa19.78■□□□□ 0.76
LAMB2-214ENST00000488638 CHD1O14646 1710 aa19.78■□□□□ 0.76
LAMB2-214ENST00000488638 GRIN2AQ12879 1464 aa19.76■□□□□ 0.75
LAMB2-214ENST00000488638 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
LAMB2-214ENST00000488638 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
LAMB2-214ENST00000488638 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
LAMB2-214ENST00000488638 NUP160Q12769 1436 aa19.69■□□□□ 0.74
LAMB2-214ENST00000488638 RAPGEF2Q9Y4G8 1499 aa19.66■□□□□ 0.74
LAMB2-214ENST00000488638 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
LAMB2-214ENST00000488638 CLASP1Q7Z460 1538 aa19.65■□□□□ 0.74
LAMB2-214ENST00000488638 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
LAMB2-214ENST00000488638 KIAA0586Q9BVV6 1533 aa19.58■□□□□ 0.73
LAMB2-214ENST00000488638 JPH4Q96JJ6 628 aa19.53■□□□□ 0.72
LAMB2-214ENST00000488638 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms