Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN2P57739 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN2P57739 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN2P57739 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CLDN2P57739 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN2P57739 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLDN2P57739 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 AC009947.2-201ENST00000444014 672 ntBASIC18.84■□□□□ 0.61
CLDN2P57739 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDN2P57739 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 AC008622.2-201ENST00000617006 1229 ntBASIC18.84■□□□□ 0.61
CLDN2P57739 AL358472.4-201ENST00000633140 710 ntBASIC18.84■□□□□ 0.61
CLDN2P57739 AL031432.5-201ENST00000641059 760 ntBASIC18.84■□□□□ 0.61
CLDN2P57739 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN2P57739 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN2P57739 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN2P57739 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN2P57739 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CLDN2P57739 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
CLDN2P57739 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN2P57739 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN2P57739 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN2P57739 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN2P57739 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN2P57739 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN2P57739 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDN2P57739 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN2P57739 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN2P57739 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.83■□□□□ 0.61
CLDN2P57739 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN2P57739 TSPY21P-201ENST00000433481 731 ntBASIC18.83■□□□□ 0.6
CLDN2P57739 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN2P57739 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CLDN2P57739 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.83■□□□□ 0.6
CLDN2P57739 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CLDN2P57739 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.83■□□□□ 0.6
CLDN2P57739 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 TREX1-205ENST00000625293 1783 ntBASIC18.83■□□□□ 0.6
CLDN2P57739 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CLDN2P57739 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CLDN2P57739 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN2P57739 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN2P57739 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
CLDN2P57739 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN2P57739 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLDN2P57739 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN2P57739 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN2P57739 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN2P57739 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN2P57739 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN2P57739 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN2P57739 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.82■□□□□ 0.6
CLDN2P57739 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CLDN2P57739 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN2P57739 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN2P57739 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CLDN2P57739 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN2P57739 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN2P57739 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN2P57739 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN2P57739 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLDN2P57739 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN2P57739 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN2P57739 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN2P57739 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN2P57739 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CLDN2P57739 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms