Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
VTNP04004 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VTNP04004 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VTNP04004 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
VTNP04004 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.93■□□□□ 0.94
VTNP04004 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.93■□□□□ 0.94
VTNP04004 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.93■□□□□ 0.94
VTNP04004 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.93■□□□□ 0.94
VTNP04004 AL158211.5-201ENST00000623583 2518 ntBASIC20.93■□□□□ 0.94
VTNP04004 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 AL359075.1-203ENST00000462729 1002 ntBASIC20.93■□□□□ 0.94
VTNP04004 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.93■□□□□ 0.94
VTNP04004 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.93■□□□□ 0.94
VTNP04004 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VTNP04004 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
VTNP04004 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
VTNP04004 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VTNP04004 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
VTNP04004 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VTNP04004 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTNP04004 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VTNP04004 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTNP04004 AL031133.1-201ENST00000406807 723 ntBASIC20.92■□□□□ 0.94
VTNP04004 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.92■□□□□ 0.94
VTNP04004 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VTNP04004 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.92■□□□□ 0.94
VTNP04004 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VTNP04004 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.92■□□□□ 0.94
VTNP04004 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.92■□□□□ 0.94
VTNP04004 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.92■□□□□ 0.94
VTNP04004 AL031432.5-201ENST00000641059 760 ntBASIC20.92■□□□□ 0.94
VTNP04004 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.92■□□□□ 0.94
VTNP04004 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.92■□□□□ 0.94
VTNP04004 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VTNP04004 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTNP04004 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.92■□□□□ 0.94
VTNP04004 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.92■□□□□ 0.94
VTNP04004 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VTNP04004 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.91■□□□□ 0.94
VTNP04004 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VTNP04004 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.91■□□□□ 0.94
VTNP04004 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.91■□□□□ 0.94
VTNP04004 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 AFG3L1P-217ENST00000557444 2447 ntBASIC20.91■□□□□ 0.94
VTNP04004 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
VTNP04004 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VTNP04004 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTNP04004 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.9■□□□□ 0.94
VTNP04004 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.9■□□□□ 0.94
VTNP04004 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.9■□□□□ 0.94
VTNP04004 GPAT2P1-201ENST00000444924 1672 ntBASIC20.9■□□□□ 0.94
VTNP04004 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.9■□□□□ 0.94
VTNP04004 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.9■□□□□ 0.94
VTNP04004 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.9■□□□□ 0.94
VTNP04004 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.9■□□□□ 0.94
VTNP04004 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.9■□□□□ 0.94
VTNP04004 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
VTNP04004 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
VTNP04004 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.9■□□□□ 0.94
VTNP04004 CR769767.2-201ENST00000622735 460 ntBASIC20.9■□□□□ 0.94
VTNP04004 AL358472.4-201ENST00000633140 710 ntBASIC20.9■□□□□ 0.94
VTNP04004 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
VTNP04004 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.9■□□□□ 0.94
VTNP04004 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTNP04004 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms