Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM4Q9Y4Z0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM4Q9Y4Z0 LINC01003-201ENST00000564834 1764 ntBASIC20.23■□□□□ 0.83
LSM4Q9Y4Z0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSM4Q9Y4Z0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM4Q9Y4Z0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.22■□□□□ 0.83
LSM4Q9Y4Z0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM4Q9Y4Z0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LSM4Q9Y4Z0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM4Q9Y4Z0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM4Q9Y4Z0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSM4Q9Y4Z0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LSM4Q9Y4Z0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM4Q9Y4Z0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM4Q9Y4Z0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.21■□□□□ 0.83
LSM4Q9Y4Z0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM4Q9Y4Z0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM4Q9Y4Z0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM4Q9Y4Z0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LSM4Q9Y4Z0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM4Q9Y4Z0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LSM4Q9Y4Z0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LSM4Q9Y4Z0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.2■□□□□ 0.82
LSM4Q9Y4Z0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM4Q9Y4Z0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LSM4Q9Y4Z0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.19■□□□□ 0.82
LSM4Q9Y4Z0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LSM4Q9Y4Z0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.19■□□□□ 0.82
LSM4Q9Y4Z0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM4Q9Y4Z0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM4Q9Y4Z0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LSM4Q9Y4Z0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LSM4Q9Y4Z0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LSM4Q9Y4Z0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.18■□□□□ 0.82
LSM4Q9Y4Z0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
LSM4Q9Y4Z0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.18■□□□□ 0.82
LSM4Q9Y4Z0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LSM4Q9Y4Z0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
LSM4Q9Y4Z0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.16■□□□□ 0.82
LSM4Q9Y4Z0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LSM4Q9Y4Z0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.16■□□□□ 0.82
LSM4Q9Y4Z0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LSM4Q9Y4Z0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.15■□□□□ 0.82
LSM4Q9Y4Z0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.15■□□□□ 0.82
LSM4Q9Y4Z0 AC127502.1-201ENST00000399971 1502 ntBASIC20.15■□□□□ 0.82
LSM4Q9Y4Z0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
LSM4Q9Y4Z0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
LSM4Q9Y4Z0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LSM4Q9Y4Z0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.14■□□□□ 0.81
LSM4Q9Y4Z0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LSM4Q9Y4Z0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.14■□□□□ 0.81
LSM4Q9Y4Z0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LSM4Q9Y4Z0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LSM4Q9Y4Z0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
LSM4Q9Y4Z0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LSM4Q9Y4Z0 DUX4L29-201ENST00000425409 679 ntBASIC20.13■□□□□ 0.81
LSM4Q9Y4Z0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LSM4Q9Y4Z0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.13■□□□□ 0.81
LSM4Q9Y4Z0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
LSM4Q9Y4Z0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.12■□□□□ 0.81
LSM4Q9Y4Z0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LSM4Q9Y4Z0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM4Q9Y4Z0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LSM4Q9Y4Z0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LSM4Q9Y4Z0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LSM4Q9Y4Z0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LSM4Q9Y4Z0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LSM4Q9Y4Z0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LSM4Q9Y4Z0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.1■□□□□ 0.81
LSM4Q9Y4Z0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM4Q9Y4Z0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.1■□□□□ 0.81
LSM4Q9Y4Z0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM4Q9Y4Z0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
LSM4Q9Y4Z0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LSM4Q9Y4Z0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LSM4Q9Y4Z0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LSM4Q9Y4Z0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSM4Q9Y4Z0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LSM4Q9Y4Z0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LSM4Q9Y4Z0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSM4Q9Y4Z0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LSM4Q9Y4Z0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM4Q9Y4Z0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.07■□□□□ 0.8
LSM4Q9Y4Z0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM4Q9Y4Z0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LSM4Q9Y4Z0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.07■□□□□ 0.8
LSM4Q9Y4Z0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.07■□□□□ 0.8
LSM4Q9Y4Z0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM4Q9Y4Z0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LSM4Q9Y4Z0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LSM4Q9Y4Z0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms