Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNIH4Q9P003 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CNIH4Q9P003 HLA-V-202ENST00000446817 847 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L13-201ENST00000554103 1267 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 MIR3648-2-201ENST00000581792 180 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L15-201ENST00000611059 1267 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L23-201ENST00000615195 1269 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 MIR3648-1-201ENST00000615959 180 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L24-201ENST00000617576 1269 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L22-201ENST00000618238 1269 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L20-201ENST00000619712 1269 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L21-201ENST00000622058 1269 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L10-201ENST00000622460 1267 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 DUX4L25-201ENST00000624915 1269 ntBASIC23.65■■□□□ 1.38
CNIH4Q9P003 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CNIH4Q9P003 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CNIH4Q9P003 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.64■■□□□ 1.37
CNIH4Q9P003 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.64■■□□□ 1.37
CNIH4Q9P003 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNIH4Q9P003 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CNIH4Q9P003 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNIH4Q9P003 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.63■■□□□ 1.37
CNIH4Q9P003 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNIH4Q9P003 AC135983.2-203ENST00000454486 1613 ntBASIC23.62■■□□□ 1.37
CNIH4Q9P003 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNIH4Q9P003 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.62■■□□□ 1.37
CNIH4Q9P003 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CNIH4Q9P003 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.61■■□□□ 1.37
CNIH4Q9P003 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.61■■□□□ 1.37
CNIH4Q9P003 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.61■■□□□ 1.37
CNIH4Q9P003 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CNIH4Q9P003 CR559946.2-201ENST00000623684 991 ntBASIC23.6■■□□□ 1.37
CNIH4Q9P003 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNIH4Q9P003 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNIH4Q9P003 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CNIH4Q9P003 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNIH4Q9P003 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNIH4Q9P003 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CNIH4Q9P003 AC016575.1-201ENST00000607026 382 ntBASIC23.59■■□□□ 1.37
CNIH4Q9P003 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CNIH4Q9P003 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNIH4Q9P003 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CNIH4Q9P003 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
CNIH4Q9P003 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CNIH4Q9P003 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CNIH4Q9P003 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CNIH4Q9P003 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.57■■□□□ 1.36
CNIH4Q9P003 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CNIH4Q9P003 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CNIH4Q9P003 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CNIH4Q9P003 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CNIH4Q9P003 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNIH4Q9P003 WHAMMP2-203ENST00000563942 1603 ntBASIC23.56■■□□□ 1.36
CNIH4Q9P003 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNIH4Q9P003 MIR639-201ENST00000384974 98 ntBASIC23.56■■□□□ 1.36
CNIH4Q9P003 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CNIH4Q9P003 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNIH4Q9P003 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNIH4Q9P003 AP004833.2-201ENST00000532228 1454 ntBASIC23.56■■□□□ 1.36
CNIH4Q9P003 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CNIH4Q9P003 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CNIH4Q9P003 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.55■■□□□ 1.36
CNIH4Q9P003 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CNIH4Q9P003 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.55■■□□□ 1.36
CNIH4Q9P003 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.55■■□□□ 1.36
CNIH4Q9P003 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNIH4Q9P003 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNIH4Q9P003 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.54■■□□□ 1.36
CNIH4Q9P003 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNIH4Q9P003 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNIH4Q9P003 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
CNIH4Q9P003 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
CNIH4Q9P003 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.53■■□□□ 1.36
CNIH4Q9P003 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
CNIH4Q9P003 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNIH4Q9P003 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNIH4Q9P003 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.51■■□□□ 1.35
CNIH4Q9P003 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CNIH4Q9P003 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.5■■□□□ 1.35
CNIH4Q9P003 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.5■■□□□ 1.35
CNIH4Q9P003 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNIH4Q9P003 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
CNIH4Q9P003 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNIH4Q9P003 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.49■■□□□ 1.35
CNIH4Q9P003 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
CNIH4Q9P003 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNIH4Q9P003 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.49■■□□□ 1.35
CNIH4Q9P003 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNIH4Q9P003 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNIH4Q9P003 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.48■■□□□ 1.35
CNIH4Q9P003 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNIH4Q9P003 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CNIH4Q9P003 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.47■■□□□ 1.35
CNIH4Q9P003 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CNIH4Q9P003 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.47■■□□□ 1.35
CNIH4Q9P003 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CNIH4Q9P003 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.46■■□□□ 1.35
CNIH4Q9P003 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNIH4Q9P003 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNIH4Q9P003 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms