Protein–RNA interactions for Protein: Q9NVH0

EXD2, Exonuclease 3'-5' domain-containing protein 2, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2Q9NVH0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.88■■□□□ 1.41
EXD2Q9NVH0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
EXD2Q9NVH0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.88■■□□□ 1.41
EXD2Q9NVH0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.88■■□□□ 1.41
EXD2Q9NVH0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
EXD2Q9NVH0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.88■■□□□ 1.41
EXD2Q9NVH0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.88■■□□□ 1.41
EXD2Q9NVH0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
EXD2Q9NVH0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
EXD2Q9NVH0 MIR6090-201ENST00000622481 60 ntBASIC23.87■■□□□ 1.41
EXD2Q9NVH0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.87■■□□□ 1.41
EXD2Q9NVH0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
EXD2Q9NVH0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
EXD2Q9NVH0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
EXD2Q9NVH0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
EXD2Q9NVH0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
EXD2Q9NVH0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
EXD2Q9NVH0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
EXD2Q9NVH0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.85■■□□□ 1.41
EXD2Q9NVH0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.85■■□□□ 1.41
EXD2Q9NVH0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
EXD2Q9NVH0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.84■■□□□ 1.41
EXD2Q9NVH0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
EXD2Q9NVH0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
EXD2Q9NVH0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
EXD2Q9NVH0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
EXD2Q9NVH0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
EXD2Q9NVH0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
EXD2Q9NVH0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.83■■□□□ 1.4
EXD2Q9NVH0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
EXD2Q9NVH0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
EXD2Q9NVH0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
EXD2Q9NVH0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
EXD2Q9NVH0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.82■■□□□ 1.4
EXD2Q9NVH0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
EXD2Q9NVH0 BX255925.1-201ENST00000566954 1854 ntBASIC23.81■■□□□ 1.4
EXD2Q9NVH0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
EXD2Q9NVH0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
EXD2Q9NVH0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.81■■□□□ 1.4
EXD2Q9NVH0 AC087741.3-201ENST00000624270 1347 ntBASIC23.81■■□□□ 1.4
EXD2Q9NVH0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
EXD2Q9NVH0 AC100797.4-201ENST00000631653 1827 ntBASIC23.8■■□□□ 1.4
EXD2Q9NVH0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.8■■□□□ 1.4
EXD2Q9NVH0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
EXD2Q9NVH0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
EXD2Q9NVH0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
EXD2Q9NVH0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
EXD2Q9NVH0 AL162393.1-201ENST00000437852 946 ntBASIC23.79■■□□□ 1.4
EXD2Q9NVH0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
EXD2Q9NVH0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
EXD2Q9NVH0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
EXD2Q9NVH0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EXD2Q9NVH0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.78■■□□□ 1.4
EXD2Q9NVH0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
EXD2Q9NVH0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EXD2Q9NVH0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.77■■□□□ 1.4
EXD2Q9NVH0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.77■■□□□ 1.4
EXD2Q9NVH0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.77■■□□□ 1.4
EXD2Q9NVH0 AC044849.2-201ENST00000606596 710 ntBASIC23.77■■□□□ 1.4
EXD2Q9NVH0 AC135983.2-203ENST00000454486 1613 ntBASIC23.77■■□□□ 1.4
EXD2Q9NVH0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.76■■□□□ 1.39
EXD2Q9NVH0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
EXD2Q9NVH0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.76■■□□□ 1.39
EXD2Q9NVH0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
EXD2Q9NVH0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
EXD2Q9NVH0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.75■■□□□ 1.39
EXD2Q9NVH0 LINC00273-201ENST00000539813 1452 ntBASIC23.75■■□□□ 1.39
EXD2Q9NVH0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
EXD2Q9NVH0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
EXD2Q9NVH0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.74■■□□□ 1.39
EXD2Q9NVH0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EXD2Q9NVH0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
EXD2Q9NVH0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EXD2Q9NVH0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.73■■□□□ 1.39
EXD2Q9NVH0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EXD2Q9NVH0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EXD2Q9NVH0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EXD2Q9NVH0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.72■■□□□ 1.39
EXD2Q9NVH0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
EXD2Q9NVH0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
EXD2Q9NVH0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.71■■□□□ 1.39
EXD2Q9NVH0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.71■■□□□ 1.39
EXD2Q9NVH0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
EXD2Q9NVH0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
EXD2Q9NVH0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.7■■□□□ 1.38
EXD2Q9NVH0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
EXD2Q9NVH0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
EXD2Q9NVH0 WHAMMP2-203ENST00000563942 1603 ntBASIC23.7■■□□□ 1.38
EXD2Q9NVH0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
EXD2Q9NVH0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.69■■□□□ 1.38
EXD2Q9NVH0 AP002414.2-202ENST00000590929 1450 ntBASIC23.68■■□□□ 1.38
EXD2Q9NVH0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
EXD2Q9NVH0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.68■■□□□ 1.38
EXD2Q9NVH0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
EXD2Q9NVH0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
EXD2Q9NVH0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
EXD2Q9NVH0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
EXD2Q9NVH0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EXD2Q9NVH0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.67■■□□□ 1.38
EXD2Q9NVH0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms