Protein–RNA interactions for Protein: Q9HD33

MRPL47, 39S ribosomal protein L47, mitochondrial, humanhuman

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47Q9HD33 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MRPL47Q9HD33 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.81■■□□□ 1.88
MRPL47Q9HD33 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MRPL47Q9HD33 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.8■■□□□ 1.88
MRPL47Q9HD33 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.8■■□□□ 1.88
MRPL47Q9HD33 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.8■■□□□ 1.88
MRPL47Q9HD33 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
MRPL47Q9HD33 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.79■■□□□ 1.88
MRPL47Q9HD33 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
MRPL47Q9HD33 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.79■■□□□ 1.88
MRPL47Q9HD33 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.79■■□□□ 1.88
MRPL47Q9HD33 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.77■■□□□ 1.88
MRPL47Q9HD33 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
MRPL47Q9HD33 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.77■■□□□ 1.88
MRPL47Q9HD33 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.76■■□□□ 1.87
MRPL47Q9HD33 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
MRPL47Q9HD33 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
MRPL47Q9HD33 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
MRPL47Q9HD33 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.74■■□□□ 1.87
MRPL47Q9HD33 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
MRPL47Q9HD33 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
MRPL47Q9HD33 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.73■■□□□ 1.87
MRPL47Q9HD33 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
MRPL47Q9HD33 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
MRPL47Q9HD33 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
MRPL47Q9HD33 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
MRPL47Q9HD33 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
MRPL47Q9HD33 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
MRPL47Q9HD33 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
MRPL47Q9HD33 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
MRPL47Q9HD33 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
MRPL47Q9HD33 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.71■■□□□ 1.87
MRPL47Q9HD33 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
MRPL47Q9HD33 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
MRPL47Q9HD33 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
MRPL47Q9HD33 AL121749.1-202ENST00000609313 2153 ntBASIC26.7■■□□□ 1.86
MRPL47Q9HD33 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
MRPL47Q9HD33 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
MRPL47Q9HD33 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
MRPL47Q9HD33 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
MRPL47Q9HD33 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
MRPL47Q9HD33 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
MRPL47Q9HD33 AC018358.1-201ENST00000631079 1402 ntBASIC26.68■■□□□ 1.86
MRPL47Q9HD33 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
MRPL47Q9HD33 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.68■■□□□ 1.86
MRPL47Q9HD33 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
MRPL47Q9HD33 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MRPL47Q9HD33 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
MRPL47Q9HD33 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.66■■□□□ 1.86
MRPL47Q9HD33 DUX4L29-201ENST00000425409 679 ntBASIC26.66■■□□□ 1.86
MRPL47Q9HD33 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
MRPL47Q9HD33 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
MRPL47Q9HD33 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
MRPL47Q9HD33 AC021231.2-201ENST00000594613 730 ntBASIC26.65■■□□□ 1.86
MRPL47Q9HD33 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
MRPL47Q9HD33 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
MRPL47Q9HD33 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
MRPL47Q9HD33 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
MRPL47Q9HD33 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
MRPL47Q9HD33 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.64■■□□□ 1.85
MRPL47Q9HD33 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
MRPL47Q9HD33 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
MRPL47Q9HD33 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MRPL47Q9HD33 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MRPL47Q9HD33 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.62■■□□□ 1.85
MRPL47Q9HD33 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
MRPL47Q9HD33 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
MRPL47Q9HD33 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
MRPL47Q9HD33 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
MRPL47Q9HD33 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.6■■□□□ 1.85
MRPL47Q9HD33 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
MRPL47Q9HD33 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
MRPL47Q9HD33 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.59■■□□□ 1.85
MRPL47Q9HD33 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
MRPL47Q9HD33 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
MRPL47Q9HD33 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.59■■□□□ 1.85
MRPL47Q9HD33 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
MRPL47Q9HD33 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MRPL47Q9HD33 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
MRPL47Q9HD33 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MRPL47Q9HD33 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
MRPL47Q9HD33 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
MRPL47Q9HD33 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
MRPL47Q9HD33 RPS2P35-201ENST00000443417 897 ntBASIC26.58■■□□□ 1.85
MRPL47Q9HD33 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.58■■□□□ 1.85
MRPL47Q9HD33 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
MRPL47Q9HD33 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
MRPL47Q9HD33 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
MRPL47Q9HD33 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.56■■□□□ 1.84
MRPL47Q9HD33 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
MRPL47Q9HD33 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
MRPL47Q9HD33 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
MRPL47Q9HD33 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
MRPL47Q9HD33 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.55■■□□□ 1.84
MRPL47Q9HD33 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
MRPL47Q9HD33 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
MRPL47Q9HD33 AC110285.7-201ENST00000624417 1536 ntBASIC26.55■■□□□ 1.84
MRPL47Q9HD33 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
MRPL47Q9HD33 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.54■■□□□ 1.84
MRPL47Q9HD33 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms