Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.96■■□□□ 1.11
SEH1LQ96EE3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.95■■□□□ 1.11
SEH1LQ96EE3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEH1LQ96EE3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SEH1LQ96EE3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEH1LQ96EE3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEH1LQ96EE3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SEH1LQ96EE3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.94■■□□□ 1.1
SEH1LQ96EE3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.94■■□□□ 1.1
SEH1LQ96EE3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SEH1LQ96EE3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SEH1LQ96EE3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SEH1LQ96EE3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SEH1LQ96EE3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.94■■□□□ 1.1
SEH1LQ96EE3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SEH1LQ96EE3 AC127502.1-201ENST00000399971 1502 ntBASIC21.93■■□□□ 1.1
SEH1LQ96EE3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.93■■□□□ 1.1
SEH1LQ96EE3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SEH1LQ96EE3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SEH1LQ96EE3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SEH1LQ96EE3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SEH1LQ96EE3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SEH1LQ96EE3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.91■■□□□ 1.1
SEH1LQ96EE3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
SEH1LQ96EE3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEH1LQ96EE3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEH1LQ96EE3 AC108673.1-201ENST00000510422 1159 ntBASIC21.91■■□□□ 1.1
SEH1LQ96EE3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEH1LQ96EE3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SEH1LQ96EE3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SEH1LQ96EE3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SEH1LQ96EE3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEH1LQ96EE3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SEH1LQ96EE3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SEH1LQ96EE3 AC044849.2-201ENST00000606596 710 ntBASIC21.89■■□□□ 1.09
SEH1LQ96EE3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SEH1LQ96EE3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEH1LQ96EE3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.88■■□□□ 1.09
SEH1LQ96EE3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEH1LQ96EE3 AP004833.2-201ENST00000532228 1454 ntBASIC21.88■■□□□ 1.09
SEH1LQ96EE3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SEH1LQ96EE3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.88■■□□□ 1.09
SEH1LQ96EE3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SEH1LQ96EE3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SEH1LQ96EE3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SEH1LQ96EE3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SEH1LQ96EE3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SEH1LQ96EE3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.86■■□□□ 1.09
SEH1LQ96EE3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SEH1LQ96EE3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.86■■□□□ 1.09
SEH1LQ96EE3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SEH1LQ96EE3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEH1LQ96EE3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEH1LQ96EE3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SEH1LQ96EE3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SEH1LQ96EE3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.85■■□□□ 1.09
SEH1LQ96EE3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SEH1LQ96EE3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.85■■□□□ 1.09
SEH1LQ96EE3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.85■■□□□ 1.09
SEH1LQ96EE3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SEH1LQ96EE3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.84■■□□□ 1.09
SEH1LQ96EE3 LINC01003-201ENST00000564834 1764 ntBASIC21.84■■□□□ 1.09
SEH1LQ96EE3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SEH1LQ96EE3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
SEH1LQ96EE3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SEH1LQ96EE3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.83■■□□□ 1.09
SEH1LQ96EE3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
SEH1LQ96EE3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.83■■□□□ 1.08
SEH1LQ96EE3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.83■■□□□ 1.08
SEH1LQ96EE3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.83■■□□□ 1.08
SEH1LQ96EE3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEH1LQ96EE3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEH1LQ96EE3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
SEH1LQ96EE3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEH1LQ96EE3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEH1LQ96EE3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SEH1LQ96EE3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.81■■□□□ 1.08
SEH1LQ96EE3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEH1LQ96EE3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.81■■□□□ 1.08
SEH1LQ96EE3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
SEH1LQ96EE3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SEH1LQ96EE3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.8■■□□□ 1.08
SEH1LQ96EE3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SEH1LQ96EE3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SEH1LQ96EE3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEH1LQ96EE3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.79■■□□□ 1.08
SEH1LQ96EE3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
SEH1LQ96EE3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
SEH1LQ96EE3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.78■■□□□ 1.08
SEH1LQ96EE3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SEH1LQ96EE3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SEH1LQ96EE3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEH1LQ96EE3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
SEH1LQ96EE3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SEH1LQ96EE3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SEH1LQ96EE3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEH1LQ96EE3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.77■■□□□ 1.08
SEH1LQ96EE3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SEH1LQ96EE3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
SEH1LQ96EE3 AL449106.1-201ENST00000608517 1980 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms