Protein–RNA interactions for Protein: Q8WXA8

HTR3C, 5-hydroxytryptamine receptor 3C, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3CQ8WXA8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
HTR3CQ8WXA8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.07■■□□□ 1.76
HTR3CQ8WXA8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
HTR3CQ8WXA8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HTR3CQ8WXA8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
HTR3CQ8WXA8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
HTR3CQ8WXA8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
HTR3CQ8WXA8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.04■■□□□ 1.76
HTR3CQ8WXA8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.04■■□□□ 1.76
HTR3CQ8WXA8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
HTR3CQ8WXA8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
HTR3CQ8WXA8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.04■■□□□ 1.76
HTR3CQ8WXA8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.03■■□□□ 1.76
HTR3CQ8WXA8 LINC01003-201ENST00000564834 1764 ntBASIC26.03■■□□□ 1.76
HTR3CQ8WXA8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
HTR3CQ8WXA8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.03■■□□□ 1.76
HTR3CQ8WXA8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
HTR3CQ8WXA8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.02■■□□□ 1.76
HTR3CQ8WXA8 AC021231.2-201ENST00000594613 730 ntBASIC26.02■■□□□ 1.76
HTR3CQ8WXA8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.02■■□□□ 1.76
HTR3CQ8WXA8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
HTR3CQ8WXA8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
HTR3CQ8WXA8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.01■■□□□ 1.75
HTR3CQ8WXA8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
HTR3CQ8WXA8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HTR3CQ8WXA8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
HTR3CQ8WXA8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26■■□□□ 1.75
HTR3CQ8WXA8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26■■□□□ 1.75
HTR3CQ8WXA8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
HTR3CQ8WXA8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
HTR3CQ8WXA8 DUX4L29-201ENST00000425409 679 ntBASIC25.99■■□□□ 1.75
HTR3CQ8WXA8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.99■■□□□ 1.75
HTR3CQ8WXA8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
HTR3CQ8WXA8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
HTR3CQ8WXA8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HTR3CQ8WXA8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HTR3CQ8WXA8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
HTR3CQ8WXA8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
HTR3CQ8WXA8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
HTR3CQ8WXA8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HTR3CQ8WXA8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HTR3CQ8WXA8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HTR3CQ8WXA8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HTR3CQ8WXA8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
HTR3CQ8WXA8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
HTR3CQ8WXA8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
HTR3CQ8WXA8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.94■■□□□ 1.74
HTR3CQ8WXA8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
HTR3CQ8WXA8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HTR3CQ8WXA8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HTR3CQ8WXA8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
HTR3CQ8WXA8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
HTR3CQ8WXA8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.94■■□□□ 1.74
HTR3CQ8WXA8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
HTR3CQ8WXA8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
HTR3CQ8WXA8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.92■■□□□ 1.74
HTR3CQ8WXA8 AL121749.1-202ENST00000609313 2153 ntBASIC25.9■■□□□ 1.74
HTR3CQ8WXA8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HTR3CQ8WXA8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
HTR3CQ8WXA8 AC018358.1-201ENST00000631079 1402 ntBASIC25.9■■□□□ 1.74
HTR3CQ8WXA8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
HTR3CQ8WXA8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.89■■□□□ 1.74
HTR3CQ8WXA8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.89■■□□□ 1.74
HTR3CQ8WXA8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
HTR3CQ8WXA8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
HTR3CQ8WXA8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
HTR3CQ8WXA8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
HTR3CQ8WXA8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.88■■□□□ 1.73
HTR3CQ8WXA8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTR3CQ8WXA8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTR3CQ8WXA8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
HTR3CQ8WXA8 HLA-V-202ENST00000446817 847 ntBASIC25.87■■□□□ 1.73
HTR3CQ8WXA8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HTR3CQ8WXA8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.86■■□□□ 1.73
HTR3CQ8WXA8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.86■■□□□ 1.73
HTR3CQ8WXA8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
HTR3CQ8WXA8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
HTR3CQ8WXA8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
HTR3CQ8WXA8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
HTR3CQ8WXA8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
HTR3CQ8WXA8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.85■■□□□ 1.73
HTR3CQ8WXA8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
HTR3CQ8WXA8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
HTR3CQ8WXA8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
HTR3CQ8WXA8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.85■■□□□ 1.73
HTR3CQ8WXA8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.85■■□□□ 1.73
HTR3CQ8WXA8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
HTR3CQ8WXA8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.84■■□□□ 1.73
HTR3CQ8WXA8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.84■■□□□ 1.73
HTR3CQ8WXA8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
HTR3CQ8WXA8 AC110285.7-201ENST00000624417 1536 ntBASIC25.83■■□□□ 1.73
HTR3CQ8WXA8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.83■■□□□ 1.73
HTR3CQ8WXA8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
HTR3CQ8WXA8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HTR3CQ8WXA8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.82■■□□□ 1.72
HTR3CQ8WXA8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.82■■□□□ 1.72
HTR3CQ8WXA8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
HTR3CQ8WXA8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
HTR3CQ8WXA8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
HTR3CQ8WXA8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms