Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C3orf56Q8N813 MIR219A2-201ENST00000608502 1504 ntBASIC20.02■□□□□ 0.8
C3orf56Q8N813 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf56Q8N813 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf56Q8N813 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.02■□□□□ 0.8
C3orf56Q8N813 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf56Q8N813 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.02■□□□□ 0.8
C3orf56Q8N813 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
C3orf56Q8N813 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf56Q8N813 AL451085.2-201ENST00000605085 799 ntBASIC20.01■□□□□ 0.79
C3orf56Q8N813 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
C3orf56Q8N813 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
C3orf56Q8N813 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf56Q8N813 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20■□□□□ 0.79
C3orf56Q8N813 AC129492.7-201ENST00000622992 756 ntBASIC20■□□□□ 0.79
C3orf56Q8N813 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
C3orf56Q8N813 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
C3orf56Q8N813 AL161658.1-201ENST00000623641 1967 ntBASIC19.99■□□□□ 0.79
C3orf56Q8N813 WHAMMP2-203ENST00000563942 1603 ntBASIC19.99■□□□□ 0.79
C3orf56Q8N813 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
C3orf56Q8N813 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
C3orf56Q8N813 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
C3orf56Q8N813 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
C3orf56Q8N813 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
C3orf56Q8N813 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
C3orf56Q8N813 AC135983.2-203ENST00000454486 1613 ntBASIC19.98■□□□□ 0.79
C3orf56Q8N813 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf56Q8N813 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf56Q8N813 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf56Q8N813 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf56Q8N813 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
C3orf56Q8N813 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.97■□□□□ 0.79
C3orf56Q8N813 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
C3orf56Q8N813 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
C3orf56Q8N813 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.96■□□□□ 0.79
C3orf56Q8N813 BHLHE23-202ENST00000612929 1109 ntBASIC19.96■□□□□ 0.79
C3orf56Q8N813 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC19.96■□□□□ 0.79
C3orf56Q8N813 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
C3orf56Q8N813 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
C3orf56Q8N813 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
C3orf56Q8N813 AC131212.1-201ENST00000613771 668 ntBASIC19.95■□□□□ 0.78
C3orf56Q8N813 AC133552.2-201ENST00000619106 1032 ntBASIC19.95■□□□□ 0.78
C3orf56Q8N813 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.94■□□□□ 0.78
C3orf56Q8N813 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
C3orf56Q8N813 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
C3orf56Q8N813 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
C3orf56Q8N813 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.94■□□□□ 0.78
C3orf56Q8N813 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
C3orf56Q8N813 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
C3orf56Q8N813 AC127502.1-201ENST00000399971 1502 ntBASIC19.93■□□□□ 0.78
C3orf56Q8N813 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C3orf56Q8N813 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C3orf56Q8N813 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
C3orf56Q8N813 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
C3orf56Q8N813 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.93■□□□□ 0.78
C3orf56Q8N813 AL592293.1-201ENST00000502889 1188 ntBASIC19.93■□□□□ 0.78
C3orf56Q8N813 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C3orf56Q8N813 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
C3orf56Q8N813 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.93■□□□□ 0.78
C3orf56Q8N813 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C3orf56Q8N813 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC19.92■□□□□ 0.78
C3orf56Q8N813 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.92■□□□□ 0.78
C3orf56Q8N813 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
C3orf56Q8N813 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.92■□□□□ 0.78
C3orf56Q8N813 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C3orf56Q8N813 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C3orf56Q8N813 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C3orf56Q8N813 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C3orf56Q8N813 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
C3orf56Q8N813 AC007029.1-201ENST00000604183 313 ntBASIC19.91■□□□□ 0.78
C3orf56Q8N813 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C3orf56Q8N813 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
C3orf56Q8N813 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
C3orf56Q8N813 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C3orf56Q8N813 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C3orf56Q8N813 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
C3orf56Q8N813 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.89■□□□□ 0.77
C3orf56Q8N813 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.89■□□□□ 0.77
C3orf56Q8N813 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
C3orf56Q8N813 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C3orf56Q8N813 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.88■□□□□ 0.77
C3orf56Q8N813 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C3orf56Q8N813 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C3orf56Q8N813 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C3orf56Q8N813 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C3orf56Q8N813 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.87■□□□□ 0.77
C3orf56Q8N813 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C3orf56Q8N813 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
C3orf56Q8N813 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.87■□□□□ 0.77
C3orf56Q8N813 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.87■□□□□ 0.77
C3orf56Q8N813 AC009831.1-201ENST00000580420 1582 ntBASIC19.87■□□□□ 0.77
C3orf56Q8N813 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C3orf56Q8N813 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
C3orf56Q8N813 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C3orf56Q8N813 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.86■□□□□ 0.77
C3orf56Q8N813 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
C3orf56Q8N813 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
C3orf56Q8N813 KRT8P33-201ENST00000508125 1423 ntBASIC19.85■□□□□ 0.77
C3orf56Q8N813 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
C3orf56Q8N813 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms