Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST3H2BBQ8N257 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST3H2BBQ8N257 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST3H2BBQ8N257 AC145676.1-201ENST00000514988 2004 ntBASIC19.29■□□□□ 0.68
HIST3H2BBQ8N257 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HIST3H2BBQ8N257 AC079834.2-201ENST00000609776 1949 ntBASIC19.28■□□□□ 0.68
HIST3H2BBQ8N257 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST3H2BBQ8N257 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.28■□□□□ 0.68
HIST3H2BBQ8N257 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST3H2BBQ8N257 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
HIST3H2BBQ8N257 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HIST3H2BBQ8N257 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.27■□□□□ 0.67
HIST3H2BBQ8N257 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIST3H2BBQ8N257 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.27■□□□□ 0.67
HIST3H2BBQ8N257 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIST3H2BBQ8N257 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
HIST3H2BBQ8N257 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HIST3H2BBQ8N257 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.26■□□□□ 0.67
HIST3H2BBQ8N257 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST3H2BBQ8N257 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST3H2BBQ8N257 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HIST3H2BBQ8N257 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.26■□□□□ 0.67
HIST3H2BBQ8N257 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST3H2BBQ8N257 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST3H2BBQ8N257 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST3H2BBQ8N257 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST3H2BBQ8N257 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST3H2BBQ8N257 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIST3H2BBQ8N257 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIST3H2BBQ8N257 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIST3H2BBQ8N257 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
HIST3H2BBQ8N257 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST3H2BBQ8N257 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST3H2BBQ8N257 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST3H2BBQ8N257 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST3H2BBQ8N257 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST3H2BBQ8N257 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST3H2BBQ8N257 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.23■□□□□ 0.67
HIST3H2BBQ8N257 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.23■□□□□ 0.67
HIST3H2BBQ8N257 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST3H2BBQ8N257 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.21■□□□□ 0.67
HIST3H2BBQ8N257 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST3H2BBQ8N257 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST3H2BBQ8N257 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HIST3H2BBQ8N257 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST3H2BBQ8N257 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST3H2BBQ8N257 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.2■□□□□ 0.66
HIST3H2BBQ8N257 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST3H2BBQ8N257 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
HIST3H2BBQ8N257 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.19■□□□□ 0.66
HIST3H2BBQ8N257 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST3H2BBQ8N257 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST3H2BBQ8N257 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST3H2BBQ8N257 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIST3H2BBQ8N257 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST3H2BBQ8N257 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIST3H2BBQ8N257 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
HIST3H2BBQ8N257 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST3H2BBQ8N257 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIST3H2BBQ8N257 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST3H2BBQ8N257 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST3H2BBQ8N257 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST3H2BBQ8N257 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST3H2BBQ8N257 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIST3H2BBQ8N257 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST3H2BBQ8N257 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST3H2BBQ8N257 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIST3H2BBQ8N257 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST3H2BBQ8N257 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST3H2BBQ8N257 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST3H2BBQ8N257 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.14■□□□□ 0.66
HIST3H2BBQ8N257 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST3H2BBQ8N257 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HIST3H2BBQ8N257 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST3H2BBQ8N257 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST3H2BBQ8N257 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST3H2BBQ8N257 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST3H2BBQ8N257 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST3H2BBQ8N257 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST3H2BBQ8N257 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST3H2BBQ8N257 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST3H2BBQ8N257 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST3H2BBQ8N257 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HIST3H2BBQ8N257 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST3H2BBQ8N257 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST3H2BBQ8N257 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST3H2BBQ8N257 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST3H2BBQ8N257 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST3H2BBQ8N257 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST3H2BBQ8N257 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST3H2BBQ8N257 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST3H2BBQ8N257 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.1■□□□□ 0.65
HIST3H2BBQ8N257 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST3H2BBQ8N257 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST3H2BBQ8N257 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST3H2BBQ8N257 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST3H2BBQ8N257 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HIST3H2BBQ8N257 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST3H2BBQ8N257 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.08■□□□□ 0.65
HIST3H2BBQ8N257 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms