Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL13A1Q5TAT6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
COL13A1Q5TAT6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.89■■■□□ 2.38
COL13A1Q5TAT6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
COL13A1Q5TAT6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.88■■■□□ 2.37
COL13A1Q5TAT6 AC133552.2-201ENST00000619106 1032 ntBASIC29.88■■■□□ 2.37
COL13A1Q5TAT6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
COL13A1Q5TAT6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 AC009831.1-201ENST00000580420 1582 ntBASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 AC074183.2-201ENST00000623112 922 ntBASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.86■■■□□ 2.37
COL13A1Q5TAT6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
COL13A1Q5TAT6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
COL13A1Q5TAT6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
COL13A1Q5TAT6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.83■■■□□ 2.37
COL13A1Q5TAT6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
COL13A1Q5TAT6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
COL13A1Q5TAT6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.81■■■□□ 2.36
COL13A1Q5TAT6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.81■■■□□ 2.36
COL13A1Q5TAT6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.81■■■□□ 2.36
COL13A1Q5TAT6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC29.81■■■□□ 2.36
COL13A1Q5TAT6 LINC00273-201ENST00000539813 1452 ntBASIC29.8■■■□□ 2.36
COL13A1Q5TAT6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
COL13A1Q5TAT6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.8■■■□□ 2.36
COL13A1Q5TAT6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC29.8■■■□□ 2.36
COL13A1Q5TAT6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
COL13A1Q5TAT6 AC104564.3-201ENST00000582367 638 ntBASIC29.79■■■□□ 2.36
COL13A1Q5TAT6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
COL13A1Q5TAT6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
COL13A1Q5TAT6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
COL13A1Q5TAT6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL13A1Q5TAT6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.78■■■□□ 2.36
COL13A1Q5TAT6 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.78■■■□□ 2.36
COL13A1Q5TAT6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
COL13A1Q5TAT6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.77■■■□□ 2.36
COL13A1Q5TAT6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
COL13A1Q5TAT6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.76■■■□□ 2.35
COL13A1Q5TAT6 RARRES2P6-201ENST00000567333 442 ntBASIC29.76■■■□□ 2.35
COL13A1Q5TAT6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
COL13A1Q5TAT6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC29.75■■■□□ 2.35
COL13A1Q5TAT6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
COL13A1Q5TAT6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.74■■■□□ 2.35
COL13A1Q5TAT6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.73■■■□□ 2.35
COL13A1Q5TAT6 DUX4L9-201ENST00000449051 1259 ntBASIC29.73■■■□□ 2.35
COL13A1Q5TAT6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.73■■■□□ 2.35
COL13A1Q5TAT6 AC007029.1-201ENST00000604183 313 ntBASIC29.72■■■□□ 2.35
COL13A1Q5TAT6 PVT1_1.1-201ENST00000615125 194 ntBASIC29.72■■■□□ 2.35
COL13A1Q5TAT6 AC239859.2-201ENST00000444165 318 ntBASIC29.71■■■□□ 2.35
COL13A1Q5TAT6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
COL13A1Q5TAT6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
COL13A1Q5TAT6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
COL13A1Q5TAT6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL13A1Q5TAT6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL13A1Q5TAT6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
COL13A1Q5TAT6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL13A1Q5TAT6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
COL13A1Q5TAT6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
COL13A1Q5TAT6 AC148477.6-201ENST00000623746 465 ntBASIC29.68■■■□□ 2.34
COL13A1Q5TAT6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL13A1Q5TAT6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL13A1Q5TAT6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
COL13A1Q5TAT6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
COL13A1Q5TAT6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.67■■■□□ 2.34
COL13A1Q5TAT6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
COL13A1Q5TAT6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
COL13A1Q5TAT6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
COL13A1Q5TAT6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.66■■■□□ 2.34
COL13A1Q5TAT6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.66■■■□□ 2.34
COL13A1Q5TAT6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
COL13A1Q5TAT6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
COL13A1Q5TAT6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
COL13A1Q5TAT6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 AC139795.1-202ENST00000500444 432 ntBASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 AL031848.2-201ENST00000607670 837 ntBASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 MIR6765-201ENST00000614092 87 ntBASIC29.63■■■□□ 2.33
COL13A1Q5TAT6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL13A1Q5TAT6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
COL13A1Q5TAT6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.62■■■□□ 2.33
COL13A1Q5TAT6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.62■■■□□ 2.33
COL13A1Q5TAT6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC29.61■■■□□ 2.33
COL13A1Q5TAT6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.61■■■□□ 2.33
COL13A1Q5TAT6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
COL13A1Q5TAT6 MIR4508-201ENST00000584178 70 ntBASIC29.61■■■□□ 2.33
COL13A1Q5TAT6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
COL13A1Q5TAT6 AC103724.3-201ENST00000564481 992 ntBASIC29.6■■■□□ 2.33
COL13A1Q5TAT6 AC005837.3-201ENST00000612163 286 ntBASIC29.6■■■□□ 2.33
COL13A1Q5TAT6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.6■■■□□ 2.33
COL13A1Q5TAT6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL13A1Q5TAT6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
COL13A1Q5TAT6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms