Protein–RNA interactions for Protein: P80188

LCN2, Neutrophil gelatinase-associated lipocalin, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2P80188 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.21■□□□□ 0.99
LCN2P80188 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.2■□□□□ 0.98
LCN2P80188 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCN2P80188 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCN2P80188 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
LCN2P80188 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCN2P80188 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
LCN2P80188 AC110285.7-201ENST00000624417 1536 ntBASIC21.19■□□□□ 0.98
LCN2P80188 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCN2P80188 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.19■□□□□ 0.98
LCN2P80188 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LCN2P80188 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCN2P80188 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCN2P80188 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
LCN2P80188 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCN2P80188 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LCN2P80188 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCN2P80188 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCN2P80188 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCN2P80188 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCN2P80188 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.18■□□□□ 0.98
LCN2P80188 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
LCN2P80188 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.18■□□□□ 0.98
LCN2P80188 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.18■□□□□ 0.98
LCN2P80188 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LCN2P80188 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCN2P80188 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
LCN2P80188 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LCN2P80188 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCN2P80188 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LCN2P80188 AC008813.1-201ENST00000536597 885 ntBASIC21.16■□□□□ 0.98
LCN2P80188 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.16■□□□□ 0.98
LCN2P80188 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
LCN2P80188 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LCN2P80188 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LCN2P80188 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
LCN2P80188 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LCN2P80188 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.14■□□□□ 0.97
LCN2P80188 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCN2P80188 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LCN2P80188 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LCN2P80188 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCN2P80188 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.13■□□□□ 0.97
LCN2P80188 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCN2P80188 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.13■□□□□ 0.97
LCN2P80188 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.13■□□□□ 0.97
LCN2P80188 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LCN2P80188 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LCN2P80188 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LCN2P80188 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LCN2P80188 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCN2P80188 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCN2P80188 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCN2P80188 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LCN2P80188 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.11■□□□□ 0.97
LCN2P80188 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCN2P80188 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LCN2P80188 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCN2P80188 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.11■□□□□ 0.97
LCN2P80188 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN2P80188 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LCN2P80188 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN2P80188 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN2P80188 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.1■□□□□ 0.97
LCN2P80188 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
LCN2P80188 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.1■□□□□ 0.97
LCN2P80188 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN2P80188 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LCN2P80188 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LCN2P80188 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LCN2P80188 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.09■□□□□ 0.97
LCN2P80188 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LCN2P80188 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LCN2P80188 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LCN2P80188 GPX1-201ENST00000419349 1106 ntBASIC21.08■□□□□ 0.97
LCN2P80188 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.08■□□□□ 0.97
LCN2P80188 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LCN2P80188 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LCN2P80188 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LCN2P80188 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.06■□□□□ 0.96
LCN2P80188 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LCN2P80188 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LCN2P80188 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.05■□□□□ 0.96
LCN2P80188 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LCN2P80188 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
LCN2P80188 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.05■□□□□ 0.96
LCN2P80188 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.05■□□□□ 0.96
LCN2P80188 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LCN2P80188 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCN2P80188 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LCN2P80188 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
LCN2P80188 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCN2P80188 AP004833.2-201ENST00000532228 1454 ntBASIC21.04■□□□□ 0.96
LCN2P80188 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCN2P80188 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LCN2P80188 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
LCN2P80188 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCN2P80188 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LCN2P80188 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LCN2P80188 AC022413.1-201ENST00000624602 984 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms