Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
THBS3P49746 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THBS3P49746 BX255925.1-201ENST00000566954 1854 ntBASIC20.79■□□□□ 0.92
THBS3P49746 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THBS3P49746 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THBS3P49746 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THBS3P49746 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THBS3P49746 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.78■□□□□ 0.92
THBS3P49746 AC100797.4-201ENST00000631653 1827 ntBASIC20.78■□□□□ 0.92
THBS3P49746 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
THBS3P49746 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
THBS3P49746 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.77■□□□□ 0.91
THBS3P49746 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS3P49746 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS3P49746 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS3P49746 ABHD17AP4-201ENST00000411545 909 ntBASIC20.76■□□□□ 0.91
THBS3P49746 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS3P49746 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THBS3P49746 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THBS3P49746 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THBS3P49746 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
THBS3P49746 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
THBS3P49746 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS3P49746 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS3P49746 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
THBS3P49746 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
THBS3P49746 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
THBS3P49746 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.73■□□□□ 0.91
THBS3P49746 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
THBS3P49746 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THBS3P49746 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.73■□□□□ 0.91
THBS3P49746 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THBS3P49746 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
THBS3P49746 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THBS3P49746 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THBS3P49746 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.72■□□□□ 0.91
THBS3P49746 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THBS3P49746 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THBS3P49746 MIR6090-201ENST00000622481 60 ntBASIC20.72■□□□□ 0.91
THBS3P49746 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THBS3P49746 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
THBS3P49746 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
THBS3P49746 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.71■□□□□ 0.91
THBS3P49746 AP002414.2-202ENST00000590929 1450 ntBASIC20.71■□□□□ 0.91
THBS3P49746 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
THBS3P49746 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.71■□□□□ 0.91
THBS3P49746 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
THBS3P49746 AC135983.2-203ENST00000454486 1613 ntBASIC20.71■□□□□ 0.91
THBS3P49746 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
THBS3P49746 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.7■□□□□ 0.9
THBS3P49746 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS3P49746 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
THBS3P49746 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
THBS3P49746 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
THBS3P49746 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
THBS3P49746 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THBS3P49746 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
THBS3P49746 MIR7108-201ENST00000614319 87 ntBASIC20.69■□□□□ 0.9
THBS3P49746 LINC01003-201ENST00000564834 1764 ntBASIC20.69■□□□□ 0.9
THBS3P49746 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.69■□□□□ 0.9
THBS3P49746 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS3P49746 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS3P49746 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.68■□□□□ 0.9
THBS3P49746 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
THBS3P49746 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS3P49746 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
THBS3P49746 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
THBS3P49746 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.67■□□□□ 0.9
THBS3P49746 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.67■□□□□ 0.9
THBS3P49746 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
THBS3P49746 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
THBS3P49746 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
THBS3P49746 LINC00273-201ENST00000539813 1452 ntBASIC20.67■□□□□ 0.9
THBS3P49746 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
THBS3P49746 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.66■□□□□ 0.9
THBS3P49746 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.66■□□□□ 0.9
THBS3P49746 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
THBS3P49746 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
THBS3P49746 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.65■□□□□ 0.9
THBS3P49746 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.65■□□□□ 0.9
THBS3P49746 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
THBS3P49746 AL121749.1-202ENST00000609313 2153 ntBASIC20.65■□□□□ 0.9
THBS3P49746 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
THBS3P49746 WHAMMP2-203ENST00000563942 1603 ntBASIC20.64■□□□□ 0.9
THBS3P49746 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
THBS3P49746 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.64■□□□□ 0.89
THBS3P49746 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.64■□□□□ 0.89
THBS3P49746 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.64■□□□□ 0.89
THBS3P49746 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.64■□□□□ 0.89
THBS3P49746 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THBS3P49746 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THBS3P49746 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
THBS3P49746 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THBS3P49746 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
THBS3P49746 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THBS3P49746 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
THBS3P49746 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
THBS3P49746 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.61■□□□□ 0.89
THBS3P49746 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THBS3P49746 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms