Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.14■■□□□ 1.62
SDHBP21912 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.14■■□□□ 1.62
SDHBP21912 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SDHBP21912 AC009299.2-201ENST00000482477 511 ntBASIC25.13■■□□□ 1.61
SDHBP21912 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.13■■□□□ 1.61
SDHBP21912 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SDHBP21912 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.12■■□□□ 1.61
SDHBP21912 RP9P-202ENST00000450133 1212 ntBASIC25.12■■□□□ 1.61
SDHBP21912 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SDHBP21912 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC25.12■■□□□ 1.61
SDHBP21912 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SDHBP21912 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SDHBP21912 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SDHBP21912 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.1■■□□□ 1.61
SDHBP21912 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
SDHBP21912 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
SDHBP21912 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SDHBP21912 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SDHBP21912 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SDHBP21912 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.09■■□□□ 1.61
SDHBP21912 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.09■■□□□ 1.61
SDHBP21912 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
SDHBP21912 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.08■■□□□ 1.61
SDHBP21912 BHLHE23-202ENST00000612929 1109 ntBASIC25.08■■□□□ 1.61
SDHBP21912 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.6
SDHBP21912 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SDHBP21912 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SDHBP21912 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SDHBP21912 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.07■■□□□ 1.6
SDHBP21912 GUSBP5-201ENST00000418136 578 ntBASIC25.06■■□□□ 1.6
SDHBP21912 AL592293.1-201ENST00000502889 1188 ntBASIC25.06■■□□□ 1.6
SDHBP21912 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.06■■□□□ 1.6
SDHBP21912 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SDHBP21912 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SDHBP21912 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
SDHBP21912 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
SDHBP21912 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.05■■□□□ 1.6
SDHBP21912 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.05■■□□□ 1.6
SDHBP21912 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SDHBP21912 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.05■■□□□ 1.6
SDHBP21912 YBX1P4-201ENST00000392794 808 ntBASIC25.05■■□□□ 1.6
SDHBP21912 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SDHBP21912 AC133552.2-201ENST00000619106 1032 ntBASIC25.05■■□□□ 1.6
SDHBP21912 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SDHBP21912 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SDHBP21912 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.04■■□□□ 1.6
SDHBP21912 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SDHBP21912 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SDHBP21912 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SDHBP21912 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SDHBP21912 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SDHBP21912 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC25.03■■□□□ 1.6
SDHBP21912 AC007029.1-201ENST00000604183 313 ntBASIC25.03■■□□□ 1.6
SDHBP21912 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
SDHBP21912 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.02■■□□□ 1.6
SDHBP21912 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.02■■□□□ 1.6
SDHBP21912 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SDHBP21912 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SDHBP21912 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.01■■□□□ 1.59
SDHBP21912 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SDHBP21912 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SDHBP21912 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25■■□□□ 1.59
SDHBP21912 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25■■□□□ 1.59
SDHBP21912 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SDHBP21912 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25■■□□□ 1.59
SDHBP21912 MIR219A2-201ENST00000608502 1504 ntBASIC25■■□□□ 1.59
SDHBP21912 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
SDHBP21912 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.99■■□□□ 1.59
SDHBP21912 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.99■■□□□ 1.59
SDHBP21912 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.99■■□□□ 1.59
SDHBP21912 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SDHBP21912 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.98■■□□□ 1.59
SDHBP21912 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
SDHBP21912 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SDHBP21912 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
SDHBP21912 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SDHBP21912 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SDHBP21912 AC009831.1-201ENST00000580420 1582 ntBASIC24.96■■□□□ 1.59
SDHBP21912 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SDHBP21912 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.95■■□□□ 1.58
SDHBP21912 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.95■■□□□ 1.58
SDHBP21912 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SDHBP21912 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SDHBP21912 KRT8P33-201ENST00000508125 1423 ntBASIC24.95■■□□□ 1.58
SDHBP21912 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SDHBP21912 AC110285.7-201ENST00000624417 1536 ntBASIC24.94■■□□□ 1.58
SDHBP21912 AL356441.2-201ENST00000443009 864 ntBASIC24.93■■□□□ 1.58
SDHBP21912 AC025884.2-201ENST00000553429 711 ntBASIC24.93■■□□□ 1.58
SDHBP21912 AC010980.1-201ENST00000587192 1142 ntBASIC24.93■■□□□ 1.58
SDHBP21912 AC008406.3-201ENST00000620001 1374 ntBASIC24.93■■□□□ 1.58
SDHBP21912 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.92■■□□□ 1.58
SDHBP21912 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.92■■□□□ 1.58
SDHBP21912 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
SDHBP21912 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
SDHBP21912 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SDHBP21912 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SDHBP21912 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
SDHBP21912 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.9■■□□□ 1.58
SDHBP21912 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.9■■□□□ 1.58
SDHBP21912 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms