Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
MT-ND3P03897 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.68■■□□□ 1.7
MT-ND3P03897 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
MT-ND3P03897 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.68■■□□□ 1.7
MT-ND3P03897 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
MT-ND3P03897 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
MT-ND3P03897 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MT-ND3P03897 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MT-ND3P03897 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.66■■□□□ 1.7
MT-ND3P03897 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
MT-ND3P03897 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MT-ND3P03897 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.66■■□□□ 1.7
MT-ND3P03897 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
MT-ND3P03897 LINC01003-201ENST00000564834 1764 ntBASIC25.66■■□□□ 1.7
MT-ND3P03897 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MT-ND3P03897 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
MT-ND3P03897 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
MT-ND3P03897 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MT-ND3P03897 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MT-ND3P03897 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MT-ND3P03897 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MT-ND3P03897 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
MT-ND3P03897 MIR7108-201ENST00000614319 87 ntBASIC25.63■■□□□ 1.69
MT-ND3P03897 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
MT-ND3P03897 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
MT-ND3P03897 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
MT-ND3P03897 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.61■■□□□ 1.69
MT-ND3P03897 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MT-ND3P03897 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MT-ND3P03897 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MT-ND3P03897 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MT-ND3P03897 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
MT-ND3P03897 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.61■■□□□ 1.69
MT-ND3P03897 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MT-ND3P03897 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
MT-ND3P03897 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
MT-ND3P03897 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
MT-ND3P03897 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
MT-ND3P03897 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.6■■□□□ 1.69
MT-ND3P03897 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
MT-ND3P03897 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
MT-ND3P03897 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
MT-ND3P03897 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
MT-ND3P03897 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.58■■□□□ 1.69
MT-ND3P03897 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.58■■□□□ 1.69
MT-ND3P03897 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.58■■□□□ 1.69
MT-ND3P03897 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.58■■□□□ 1.69
MT-ND3P03897 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
MT-ND3P03897 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.68
MT-ND3P03897 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
MT-ND3P03897 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.57■■□□□ 1.68
MT-ND3P03897 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.57■■□□□ 1.68
MT-ND3P03897 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.57■■□□□ 1.68
MT-ND3P03897 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
MT-ND3P03897 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.56■■□□□ 1.68
MT-ND3P03897 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
MT-ND3P03897 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
MT-ND3P03897 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
MT-ND3P03897 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
MT-ND3P03897 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.55■■□□□ 1.68
MT-ND3P03897 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
MT-ND3P03897 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
MT-ND3P03897 AC100797.4-201ENST00000631653 1827 ntBASIC25.55■■□□□ 1.68
MT-ND3P03897 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MT-ND3P03897 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
MT-ND3P03897 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MT-ND3P03897 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MT-ND3P03897 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
MT-ND3P03897 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
MT-ND3P03897 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.54■■□□□ 1.68
MT-ND3P03897 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
MT-ND3P03897 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
MT-ND3P03897 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
MT-ND3P03897 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.53■■□□□ 1.68
MT-ND3P03897 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
MT-ND3P03897 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.53■■□□□ 1.68
MT-ND3P03897 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
MT-ND3P03897 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.52■■□□□ 1.68
MT-ND3P03897 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MT-ND3P03897 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MT-ND3P03897 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MT-ND3P03897 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MT-ND3P03897 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
MT-ND3P03897 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
MT-ND3P03897 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
MT-ND3P03897 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.5■■□□□ 1.67
MT-ND3P03897 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.49■■□□□ 1.67
MT-ND3P03897 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.48■■□□□ 1.67
MT-ND3P03897 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
MT-ND3P03897 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
MT-ND3P03897 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MT-ND3P03897 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.47■■□□□ 1.67
MT-ND3P03897 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MT-ND3P03897 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MT-ND3P03897 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.47■■□□□ 1.67
MT-ND3P03897 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MT-ND3P03897 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
MT-ND3P03897 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
MT-ND3P03897 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MT-ND3P03897 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms