Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.5■■□□□ 1.67
RFPL1O75677 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RFPL1O75677 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFPL1O75677 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFPL1O75677 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RFPL1O75677 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RFPL1O75677 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RFPL1O75677 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RFPL1O75677 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RFPL1O75677 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RFPL1O75677 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.47■■□□□ 1.67
RFPL1O75677 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.47■■□□□ 1.67
RFPL1O75677 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
RFPL1O75677 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RFPL1O75677 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RFPL1O75677 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.46■■□□□ 1.67
RFPL1O75677 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RFPL1O75677 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
RFPL1O75677 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
RFPL1O75677 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.45■■□□□ 1.66
RFPL1O75677 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.45■■□□□ 1.66
RFPL1O75677 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
RFPL1O75677 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RFPL1O75677 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RFPL1O75677 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.44■■□□□ 1.66
RFPL1O75677 HLA-V-202ENST00000446817 847 ntBASIC25.44■■□□□ 1.66
RFPL1O75677 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
RFPL1O75677 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RFPL1O75677 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RFPL1O75677 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RFPL1O75677 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
RFPL1O75677 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
RFPL1O75677 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
RFPL1O75677 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.43■■□□□ 1.66
RFPL1O75677 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFPL1O75677 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFPL1O75677 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.42■■□□□ 1.66
RFPL1O75677 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFPL1O75677 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RFPL1O75677 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.42■■□□□ 1.66
RFPL1O75677 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RFPL1O75677 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RFPL1O75677 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.41■■□□□ 1.66
RFPL1O75677 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.41■■□□□ 1.66
RFPL1O75677 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RFPL1O75677 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.4■■□□□ 1.66
RFPL1O75677 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
RFPL1O75677 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.66
RFPL1O75677 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RFPL1O75677 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.39■■□□□ 1.66
RFPL1O75677 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.39■■□□□ 1.66
RFPL1O75677 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
RFPL1O75677 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RFPL1O75677 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.38■■□□□ 1.65
RFPL1O75677 AP002414.2-202ENST00000590929 1450 ntBASIC25.38■■□□□ 1.65
RFPL1O75677 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.38■■□□□ 1.65
RFPL1O75677 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RFPL1O75677 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFPL1O75677 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RFPL1O75677 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFPL1O75677 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
RFPL1O75677 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RFPL1O75677 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RFPL1O75677 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.35■■□□□ 1.65
RFPL1O75677 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RFPL1O75677 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFPL1O75677 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.34■■□□□ 1.65
RFPL1O75677 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RFPL1O75677 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFPL1O75677 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.33■■□□□ 1.65
RFPL1O75677 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
RFPL1O75677 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RFPL1O75677 ZNRF2P2-203ENST00000454624 420 ntBASIC25.33■■□□□ 1.65
RFPL1O75677 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.33■■□□□ 1.65
RFPL1O75677 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.32■■□□□ 1.64
RFPL1O75677 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.32■■□□□ 1.64
RFPL1O75677 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RFPL1O75677 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.31■■□□□ 1.64
RFPL1O75677 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RFPL1O75677 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.3■■□□□ 1.64
RFPL1O75677 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.3■■□□□ 1.64
RFPL1O75677 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RFPL1O75677 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.3■■□□□ 1.64
RFPL1O75677 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RFPL1O75677 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.29■■□□□ 1.64
RFPL1O75677 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RFPL1O75677 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RFPL1O75677 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.29■■□□□ 1.64
RFPL1O75677 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RFPL1O75677 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
RFPL1O75677 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RFPL1O75677 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RFPL1O75677 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RFPL1O75677 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
RFPL1O75677 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
RFPL1O75677 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
RFPL1O75677 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RFPL1O75677 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
RFPL1O75677 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.27■■□□□ 1.64
RFPL1O75677 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms