Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CACNG3O60359 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.43■■□□□ 1.82
CACNG3O60359 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.43■■□□□ 1.82
CACNG3O60359 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CACNG3O60359 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CACNG3O60359 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CACNG3O60359 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CACNG3O60359 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
CACNG3O60359 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CACNG3O60359 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.42■■□□□ 1.82
CACNG3O60359 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.42■■□□□ 1.82
CACNG3O60359 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CACNG3O60359 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CACNG3O60359 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.42■■□□□ 1.82
CACNG3O60359 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CACNG3O60359 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.41■■□□□ 1.82
CACNG3O60359 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CACNG3O60359 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.4■■□□□ 1.82
CACNG3O60359 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CACNG3O60359 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.4■■□□□ 1.82
CACNG3O60359 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CACNG3O60359 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.39■■□□□ 1.82
CACNG3O60359 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CACNG3O60359 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CACNG3O60359 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CACNG3O60359 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CACNG3O60359 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CACNG3O60359 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
CACNG3O60359 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.36■■□□□ 1.81
CACNG3O60359 AP004833.2-201ENST00000532228 1454 ntBASIC26.36■■□□□ 1.81
CACNG3O60359 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CACNG3O60359 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CACNG3O60359 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.35■■□□□ 1.81
CACNG3O60359 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CACNG3O60359 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.35■■□□□ 1.81
CACNG3O60359 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CACNG3O60359 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CACNG3O60359 AC008813.1-201ENST00000536597 885 ntBASIC26.34■■□□□ 1.81
CACNG3O60359 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CACNG3O60359 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.33■■□□□ 1.81
CACNG3O60359 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CACNG3O60359 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.33■■□□□ 1.8
CACNG3O60359 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.32■■□□□ 1.8
CACNG3O60359 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CACNG3O60359 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.32■■□□□ 1.8
CACNG3O60359 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CACNG3O60359 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.31■■□□□ 1.8
CACNG3O60359 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CACNG3O60359 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.3■■□□□ 1.8
CACNG3O60359 AC110285.7-201ENST00000624417 1536 ntBASIC26.3■■□□□ 1.8
CACNG3O60359 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CACNG3O60359 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.3■■□□□ 1.8
CACNG3O60359 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.29■■□□□ 1.8
CACNG3O60359 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CACNG3O60359 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CACNG3O60359 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CACNG3O60359 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CACNG3O60359 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CACNG3O60359 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CACNG3O60359 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.27■■□□□ 1.8
CACNG3O60359 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
CACNG3O60359 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CACNG3O60359 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CACNG3O60359 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CACNG3O60359 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CACNG3O60359 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.26■■□□□ 1.79
CACNG3O60359 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CACNG3O60359 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
CACNG3O60359 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CACNG3O60359 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
CACNG3O60359 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CACNG3O60359 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CACNG3O60359 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CACNG3O60359 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CACNG3O60359 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.25■■□□□ 1.79
CACNG3O60359 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
CACNG3O60359 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CACNG3O60359 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CACNG3O60359 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CACNG3O60359 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.24■■□□□ 1.79
CACNG3O60359 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CACNG3O60359 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CACNG3O60359 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.23■■□□□ 1.79
CACNG3O60359 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CACNG3O60359 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CACNG3O60359 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
CACNG3O60359 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CACNG3O60359 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.22■■□□□ 1.79
CACNG3O60359 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CACNG3O60359 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
CACNG3O60359 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CACNG3O60359 GPX1-201ENST00000419349 1106 ntBASIC26.21■■□□□ 1.79
CACNG3O60359 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CACNG3O60359 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
CACNG3O60359 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.2■■□□□ 1.79
CACNG3O60359 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CACNG3O60359 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CACNG3O60359 DRD5P2-201ENST00000421395 2012 ntBASIC26.19■■□□□ 1.78
CACNG3O60359 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.19■■□□□ 1.78
CACNG3O60359 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms