Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.2■■□□□ 1.46
PCDH17O14917 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH17O14917 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH17O14917 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH17O14917 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDH17O14917 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH17O14917 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH17O14917 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDH17O14917 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDH17O14917 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH17O14917 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH17O14917 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH17O14917 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH17O14917 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDH17O14917 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH17O14917 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH17O14917 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH17O14917 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH17O14917 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
PCDH17O14917 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
PCDH17O14917 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH17O14917 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.14■■□□□ 1.45
PCDH17O14917 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
PCDH17O14917 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH17O14917 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDH17O14917 AC135983.2-203ENST00000454486 1613 ntBASIC24.12■■□□□ 1.45
PCDH17O14917 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH17O14917 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDH17O14917 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH17O14917 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.11■■□□□ 1.45
PCDH17O14917 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH17O14917 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PCDH17O14917 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH17O14917 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
PCDH17O14917 DRD5P2-201ENST00000421395 2012 ntBASIC24.09■■□□□ 1.45
PCDH17O14917 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH17O14917 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH17O14917 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH17O14917 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH17O14917 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDH17O14917 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDH17O14917 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH17O14917 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PCDH17O14917 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH17O14917 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDH17O14917 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDH17O14917 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PCDH17O14917 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
PCDH17O14917 AC008813.1-201ENST00000536597 885 ntBASIC24.04■■□□□ 1.44
PCDH17O14917 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.04■■□□□ 1.44
PCDH17O14917 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH17O14917 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
PCDH17O14917 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.04■■□□□ 1.44
PCDH17O14917 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PCDH17O14917 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
PCDH17O14917 AP004833.2-201ENST00000532228 1454 ntBASIC24.03■■□□□ 1.44
PCDH17O14917 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.03■■□□□ 1.44
PCDH17O14917 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH17O14917 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDH17O14917 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH17O14917 WHAMMP2-203ENST00000563942 1603 ntBASIC24.02■■□□□ 1.44
PCDH17O14917 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH17O14917 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDH17O14917 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24■■□□□ 1.43
PCDH17O14917 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24■■□□□ 1.43
PCDH17O14917 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH17O14917 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDH17O14917 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24■■□□□ 1.43
PCDH17O14917 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH17O14917 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH17O14917 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH17O14917 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
PCDH17O14917 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH17O14917 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH17O14917 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDH17O14917 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDH17O14917 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH17O14917 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDH17O14917 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
PCDH17O14917 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PCDH17O14917 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDH17O14917 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDH17O14917 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.95■■□□□ 1.43
PCDH17O14917 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH17O14917 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
PCDH17O14917 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PCDH17O14917 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH17O14917 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDH17O14917 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PCDH17O14917 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDH17O14917 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH17O14917 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH17O14917 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH17O14917 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.94■■□□□ 1.42
PCDH17O14917 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH17O14917 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH17O14917 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH17O14917 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH17O14917 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDH17O14917 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms