Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01546A6NGU7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
LINC01546A6NGU7 DUSP8P4-201ENST00000399538 1761 ntBASIC18.13■□□□□ 0.49
LINC01546A6NGU7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01546A6NGU7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01546A6NGU7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01546A6NGU7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.13■□□□□ 0.49
LINC01546A6NGU7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01546A6NGU7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01546A6NGU7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01546A6NGU7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.11■□□□□ 0.49
LINC01546A6NGU7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01546A6NGU7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC01546A6NGU7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC01546A6NGU7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01546A6NGU7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01546A6NGU7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01546A6NGU7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC01546A6NGU7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01546A6NGU7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01546A6NGU7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC01546A6NGU7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01546A6NGU7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
LINC01546A6NGU7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01546A6NGU7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC01546A6NGU7 AC006077.2-201ENST00000623591 457 ntBASIC18.08■□□□□ 0.48
LINC01546A6NGU7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01546A6NGU7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC01546A6NGU7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC01546A6NGU7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LINC01546A6NGU7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01546A6NGU7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC01546A6NGU7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC01546A6NGU7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01546A6NGU7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01546A6NGU7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01546A6NGU7 AP002414.2-202ENST00000590929 1450 ntBASIC18.05■□□□□ 0.48
LINC01546A6NGU7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC01546A6NGU7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LINC01546A6NGU7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01546A6NGU7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LINC01546A6NGU7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01546A6NGU7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01546A6NGU7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01546A6NGU7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.02■□□□□ 0.47
LINC01546A6NGU7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LINC01546A6NGU7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01546A6NGU7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01546A6NGU7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01546A6NGU7 DYNLL1-208ENST00000550178 581 ntBASIC18.01■□□□□ 0.47
LINC01546A6NGU7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.01■□□□□ 0.47
LINC01546A6NGU7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01546A6NGU7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01546A6NGU7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01546A6NGU7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18■□□□□ 0.47
LINC01546A6NGU7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01546A6NGU7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01546A6NGU7 AC092803.2-201ENST00000564287 1899 ntBASIC18■□□□□ 0.47
LINC01546A6NGU7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01546A6NGU7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01546A6NGU7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01546A6NGU7 AC100797.4-201ENST00000631653 1827 ntBASIC17.99■□□□□ 0.47
LINC01546A6NGU7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LINC01546A6NGU7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LINC01546A6NGU7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LINC01546A6NGU7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LINC01546A6NGU7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
LINC01546A6NGU7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01546A6NGU7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LINC01546A6NGU7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01546A6NGU7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LINC01546A6NGU7 AC127502.1-201ENST00000399971 1502 ntBASIC17.95■□□□□ 0.46
LINC01546A6NGU7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01546A6NGU7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01546A6NGU7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.95■□□□□ 0.46
LINC01546A6NGU7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01546A6NGU7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC01546A6NGU7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.95■□□□□ 0.46
LINC01546A6NGU7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LINC01546A6NGU7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LINC01546A6NGU7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LINC01546A6NGU7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms