Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCH2Q9Y6C5 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PTCH2Q9Y6C5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.64■■□□□ 1.05
PTCH2Q9Y6C5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PTCH2Q9Y6C5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 AC138894.3-201ENST00000603787 634 ntBASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 SMG8-203ENST00000578922 2178 ntBASIC21.63■■□□□ 1.05
PTCH2Q9Y6C5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 HLA-F-220ENST00000434407 884 ntBASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 AC092183.1-201ENST00000469884 875 ntBASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PTCH2Q9Y6C5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 RNF126P1-202ENST00000569893 925 ntBASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 AC007225.1-201ENST00000566331 1836 ntBASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PTCH2Q9Y6C5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 AL353801.3-201ENST00000609898 542 ntBASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PTCH2Q9Y6C5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 MIR662-201ENST00000384847 95 ntBASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 AC104819.1-201ENST00000504587 486 ntBASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PTCH2Q9Y6C5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms