Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.07■□□□□ 0
SMCO4Q9NRQ5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.07■□□□□ 0
SMCO4Q9NRQ5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 AC011676.5-201ENST00000624864 2660 ntBASIC15.06■□□□□ 0
SMCO4Q9NRQ5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 GPX1-201ENST00000419349 1106 ntBASIC15.06■□□□□ 0
SMCO4Q9NRQ5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 AC019171.1-201ENST00000601251 1056 ntBASIC15.06■□□□□ 0
SMCO4Q9NRQ5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 AC141586.3-201ENST00000562166 1838 ntBASIC15.06■□□□□ 0
SMCO4Q9NRQ5 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SMCO4Q9NRQ5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.05■□□□□ 0
SMCO4Q9NRQ5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SMCO4Q9NRQ5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.05■□□□□ 0
SMCO4Q9NRQ5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.05■□□□□ 0
SMCO4Q9NRQ5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.05■□□□□ -0
SMCO4Q9NRQ5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.04■□□□□ -0
SMCO4Q9NRQ5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms