Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.57■□□□□ 0.4
COPS4Q9BT78 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.57■□□□□ 0.4
COPS4Q9BT78 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.57■□□□□ 0.4
COPS4Q9BT78 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS4Q9BT78 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.57■□□□□ 0.4
COPS4Q9BT78 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS4Q9BT78 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS4Q9BT78 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
COPS4Q9BT78 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.57■□□□□ 0.4
COPS4Q9BT78 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS4Q9BT78 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS4Q9BT78 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
COPS4Q9BT78 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 AC022517.1-201ENST00000592429 346 ntBASIC17.56■□□□□ 0.4
COPS4Q9BT78 CYP2T3P-201ENST00000601990 817 ntBASIC17.56■□□□□ 0.4
COPS4Q9BT78 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.56■□□□□ 0.4
COPS4Q9BT78 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
COPS4Q9BT78 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 HLA-G-202ENST00000376815 851 ntBASIC17.55■□□□□ 0.4
COPS4Q9BT78 HLA-G-203ENST00000376818 1127 ntBASIC17.55■□□□□ 0.4
COPS4Q9BT78 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.55■□□□□ 0.4
COPS4Q9BT78 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COPS4Q9BT78 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 HTR7P1-202ENST00000624664 4411 ntBASIC17.54■□□□□ 0.4
COPS4Q9BT78 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms