Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM2Q96JY6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 AC020763.4-201ENST00000623414 4170 ntBASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 AL136116.3-201ENST00000402907 1138 ntBASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 AC023632.3-201ENST00000521633 145 ntBASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM2Q96JY6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 AC135776.1-201ENST00000319817 2481 ntBASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.18■□□□□ 0.98
PDLIM2Q96JY6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PDLIM2Q96JY6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM2Q96JY6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PDLIM2Q96JY6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.16■□□□□ 0.98
PDLIM2Q96JY6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PDLIM2Q96JY6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC21.16■□□□□ 0.98
PDLIM2Q96JY6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms