Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 NOC2LP2-201ENST00000407594 1944 ntBASIC18.21■□□□□ 0.51
LRRC58Q96CX6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 ANO7L1-203ENST00000602586 1720 ntBASIC18.21■□□□□ 0.51
LRRC58Q96CX6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.21■□□□□ 0.51
LRRC58Q96CX6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC58Q96CX6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
LRRC58Q96CX6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRRC58Q96CX6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRRC58Q96CX6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRRC58Q96CX6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 AC005181.1-201ENST00000604782 1256 ntBASIC18.2■□□□□ 0.5
LRRC58Q96CX6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC58Q96CX6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 AC124283.5-201ENST00000624661 1809 ntBASIC18.19■□□□□ 0.5
LRRC58Q96CX6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC58Q96CX6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms