Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.062e-7■■□□□ 12.8
SND1Q7KZF4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.58□□□□□ -0.082e-7■■□□□ 12.8
SND1Q7KZF4 ILVBL-208ENST00000533747 788 ntTSL 219.62■□□□□ 0.732e-7■■□□□ 12.8
SND1Q7KZF4 SLC19A1-203ENST00000417954 3572 ntTSL 1 (best)16.11■□□□□ 0.175e-8■■□□□ 12.8
SND1Q7KZF4 MXRA8-208ENST00000476718 1001 ntTSL 316.92■□□□□ 0.38e-7■■□□□ 12.8
SND1Q7KZF4 QSOX2-202ENST00000455222 851 ntTSL 57.09□□□□□ -1.279e-7■■□□□ 12.8
SND1Q7KZF4 LMF2-204ENST00000505981 824 ntTSL 518.13■□□□□ 0.497e-8■■□□□ 12.8
SND1Q7KZF4 DDRGK1-204ENST00000496781 865 ntTSL 1 (best)11.28□□□□□ -0.64e-9■■□□□ 12.8
SND1Q7KZF4 VIM-206ENST00000487938 2272 ntTSL 519.79■□□□□ 0.762e-10■■□□□ 12.8
SND1Q7KZF4 VIM-209ENST00000544301 2135 ntAPPRIS P1 TSL 1 (best)19.63■□□□□ 0.732e-10■■□□□ 12.8
SND1Q7KZF4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.622e-10■■□□□ 12.8
SND1Q7KZF4 ACSL3-206ENST00000463813 509 ntTSL 311.26□□□□□ -0.614e-16■■□□□ 12.8
SND1Q7KZF4 CAPRIN1-205ENST00000528856 595 ntTSL 524.34■■□□□ 1.491e-6■■□□□ 12.8
SND1Q7KZF4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.4■□□□□ 0.862e-6■■□□□ 12.8
SND1Q7KZF4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.832e-6■■□□□ 12.8
SND1Q7KZF4 SUN1-235ENST00000497943 2824 ntTSL 219.22■□□□□ 0.676e-6■■□□□ 12.8
SND1Q7KZF4 PISD-213ENST00000474017 1760 ntTSL 518.54■□□□□ 0.566e-6■■□□□ 12.8
SND1Q7KZF4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.551e-6■■□□□ 12.8
SND1Q7KZF4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.47■□□□□ 0.552e-6■■□□□ 12.8
SND1Q7KZF4 PISD-214ENST00000478893 1056 ntTSL 218.32■□□□□ 0.526e-6■■□□□ 12.8
SND1Q7KZF4 FLNA-218ENST00000498491 914 ntTSL 518.24■□□□□ 0.516e-6■■□□□ 12.8
SND1Q7KZF4 PISD-212ENST00000473770 2378 ntTSL 518.16■□□□□ 0.56e-6■■□□□ 12.8
SND1Q7KZF4 RNF121-212ENST00000530655 786 ntTSL 318.11■□□□□ 0.492e-6■■□□□ 12.8
SND1Q7KZF4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.431e-6■■□□□ 12.8
SND1Q7KZF4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.41e-6■■□□□ 12.8
SND1Q7KZF4 GHDC-204ENST00000585375 592 ntTSL 216.51■□□□□ 0.236e-6■■□□□ 12.8
SND1Q7KZF4 LGMN-209ENST00000554919 546 ntTSL 416.46■□□□□ 0.236e-6■■□□□ 12.8
SND1Q7KZF4 LGMN-203ENST00000553371 495 ntTSL 416.46■□□□□ 0.236e-6■■□□□ 12.8
SND1Q7KZF4 LGMN-206ENST00000554080 588 ntTSL 416.46■□□□□ 0.236e-6■■□□□ 12.8
SND1Q7KZF4 LGMN-208ENST00000554397 533 ntTSL 416.46■□□□□ 0.236e-6■■□□□ 12.8
SND1Q7KZF4 PISD-211ENST00000460723 2534 ntTSL 1 (best)15.66■□□□□ 0.16e-6■■□□□ 12.8
SND1Q7KZF4 PISD-217ENST00000491342 692 ntTSL 515.53■□□□□ 0.086e-6■■□□□ 12.8
SND1Q7KZF4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.046e-6■■□□□ 12.8
SND1Q7KZF4 GUSB-212ENST00000478118 571 ntTSL 414.91□□□□□ -0.022e-11■■□□□ 12.8
SND1Q7KZF4 FLNA-210ENST00000462590 1026 ntTSL 1 (best)14.7□□□□□ -0.066e-6■■□□□ 12.8
SND1Q7KZF4 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.11e-6■■□□□ 12.8
SND1Q7KZF4 PISD-203ENST00000397500 2194 ntTSL 5 BASIC14.24□□□□□ -0.136e-6■■□□□ 12.8
SND1Q7KZF4 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.04□□□□□ -0.162e-6■■□□□ 12.8
SND1Q7KZF4 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.176e-6■■□□□ 12.8
SND1Q7KZF4 RNF121-207ENST00000526549 2375 ntTSL 213.89□□□□□ -0.192e-6■■□□□ 12.8
SND1Q7KZF4 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.281e-6■■□□□ 12.8
SND1Q7KZF4 PISD-208ENST00000437808 2264 ntTSL 513.09□□□□□ -0.316e-6■■□□□ 12.8
SND1Q7KZF4 RNF121-213ENST00000532379 634 ntTSL 212.89□□□□□ -0.356e-6■■□□□ 12.8
SND1Q7KZF4 RNF121-206ENST00000525243 812 ntTSL 212.62□□□□□ -0.392e-6■■□□□ 12.8
SND1Q7KZF4 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.446e-6■■□□□ 12.8
SND1Q7KZF4 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.541e-6■■□□□ 12.8
SND1Q7KZF4 PISD-207ENST00000435900 1723 ntTSL 511.51□□□□□ -0.576e-6■■□□□ 12.8
SND1Q7KZF4 UGT2B7-203ENST00000508661 1633 ntTSL 2 BASIC10.16□□□□□ -0.786e-6■■□□□ 12.8
SND1Q7KZF4 DNAJC1-205ENST00000483085 442 ntTSL 310.11□□□□□ -0.796e-6■■□□□ 12.8
SND1Q7KZF4 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.811e-6■■□□□ 12.8
SND1Q7KZF4 UGT2B7-204ENST00000509763 744 ntTSL 59.39□□□□□ -0.916e-6■■□□□ 12.8
SND1Q7KZF4 UGT2B7-202ENST00000502942 866 ntTSL 29.25□□□□□ -0.936e-6■■□□□ 12.8
SND1Q7KZF4 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC9.09□□□□□ -0.956e-6■■□□□ 12.8
SND1Q7KZF4 SULF2-210ENST00000479970 1319 ntTSL 26.51□□□□□ -1.376e-6■■□□□ 12.8
SND1Q7KZF4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.426e-6■■□□□ 12.8
SND1Q7KZF4 OCIAD1-221ENST00000510824 582 ntTSL 39.69□□□□□ -0.863e-7■■□□□ 12.8
SND1Q7KZF4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.66■□□□□ 0.741e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-204ENST00000368298 1475 ntTSL 1 (best)19.37■□□□□ 0.691e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.76■□□□□ 0.591e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.72■□□□□ 0.591e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.69■□□□□ 0.421e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-216ENST00000496738 2405 ntTSL 217.53■□□□□ 0.41e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.33■□□□□ 0.361e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-217ENST00000498722 1348 ntTSL 216.7■□□□□ 0.261e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.56■□□□□ 0.241e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.36■□□□□ 0.051e-8■■□□□ 12.8
SND1Q7KZF4 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.281e-8■■□□□ 12.8
SND1Q7KZF4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.39■□□□□ 0.213e-7■■□□□ 12.8
SND1Q7KZF4 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.623e-7■■□□□ 12.8
SND1Q7KZF4 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC10.38□□□□□ -0.753e-7■■□□□ 12.8
SND1Q7KZF4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.571e-10■■□□□ 12.8
SND1Q7KZF4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.24■□□□□ 0.511e-10■■□□□ 12.8
SND1Q7KZF4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.181e-10■■□□□ 12.8
SND1Q7KZF4 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.041e-10■■□□□ 12.8
SND1Q7KZF4 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC13.84□□□□□ -0.191e-10■■□□□ 12.8
SND1Q7KZF4 SARS2-203ENST00000455102 1118 ntTSL 213.8□□□□□ -0.21e-10■■□□□ 12.8
SND1Q7KZF4 SARS2-213ENST00000600448 536 ntTSL 312.15□□□□□ -0.461e-10■■□□□ 12.8
SND1Q7KZF4 PROC-209ENST00000464089 563 ntTSL 418.16■□□□□ 0.53e-22■■□□□ 12.8
SND1Q7KZF4 TM9SF3-206ENST00000490192 884 ntTSL 410.66□□□□□ -0.71e-6■■□□□ 12.8
SND1Q7KZF4 RRM2-204ENST00000461327 580 ntTSL 216.07■□□□□ 0.162e-11■■□□□ 12.8
SND1Q7KZF4 RRM2-209ENST00000491447 644 ntTSL 215.89■□□□□ 0.132e-11■■□□□ 12.8
SND1Q7KZF4 RRM2-203ENST00000459969 787 ntTSL 211.78□□□□□ -0.522e-11■■□□□ 12.8
SND1Q7KZF4 CCT3-212ENST00000478640 583 ntTSL 211.67□□□□□ -0.541e-31■■□□□ 12.8
SND1Q7KZF4 GPI-212ENST00000589985 1516 ntTSL 320.48■□□□□ 0.879e-11■■□□□ 12.8
SND1Q7KZF4 TMBIM1-210ENST00000439306 631 ntTSL 512.7□□□□□ -0.385e-9■■□□□ 12.8
SND1Q7KZF4 SERPINA1-217ENST00000557118 583 ntTSL 414.11□□□□□ -0.151e-323■■□□□ 12.8
SND1Q7KZF4 APOC3-204ENST00000470144 269 ntTSL 513.58□□□□□ -0.243e-14■■□□□ 12.7
SND1Q7KZF4 APOC3-203ENST00000433777 359 ntTSL 510.24□□□□□ -0.773e-14■■□□□ 12.7
SND1Q7KZF4 BHLHE40-203ENST00000467610 1366 ntTSL 218.43■□□□□ 0.546e-12■■□□□ 12.7
SND1Q7KZF4 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.246e-12■■□□□ 12.7
SND1Q7KZF4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.75■□□□□ 0.754e-9■■□□□ 12.7
SND1Q7KZF4 TAPBP-235ENST00000437116 1239 ntTSL 1 (best)18.82■□□□□ 0.64e-9■■□□□ 12.7
SND1Q7KZF4 TMEM33-207ENST00000513558 677 ntTSL 28.9□□□□□ -0.983e-8■■□□□ 12.7
SND1Q7KZF4 TMEM33-204ENST00000506794 574 ntTSL 58.7□□□□□ -1.023e-8■■□□□ 12.7
SND1Q7KZF4 PSMA3-203ENST00000553665 925 ntTSL 28.68□□□□□ -1.022e-11■■□□□ 12.7
SND1Q7KZF4 PSMA3-210ENST00000556321 500 ntTSL 28.39□□□□□ -1.072e-11■■□□□ 12.7
SND1Q7KZF4 UBC-210ENST00000541645 548 ntTSL 218.57■□□□□ 0.561e-20■■□□□ 12.7
SND1Q7KZF4 UBC-207ENST00000540351 622 ntTSL 1 (best)13.36□□□□□ -0.271e-20■■□□□ 12.7
SND1Q7KZF4 UBC-212ENST00000544481 477 ntTSL 413.24□□□□□ -0.291e-20■■□□□ 12.7
SND1Q7KZF4 UBC-202ENST00000535131 563 ntTSL 512.89□□□□□ -0.351e-20■■□□□ 12.7
Retrieved 100 of 13,567 protein–RNA pairs in 97.6 ms