RNA–Protein interactions for RNA: ENST00000553665.5

PSMA3-203, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-203ENST00000553665 AEBP2Q6ZN18 517 aaPredicted RBP23.98■■□□□ 1.43
PSMA3-203ENST00000553665 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
PSMA3-203ENST00000553665 SENP3Q9H4L4 574 aaPredicted RBP20.6■□□□□ 0.89
PSMA3-203ENST00000553665 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
PSMA3-203ENST00000553665 FOXD1Q16676 465 aa19.25■□□□□ 0.67
PSMA3-203ENST00000553665 POTEDQ86YR6 584 aa19.02■□□□□ 0.64
PSMA3-203ENST00000553665 MSH5O43196 834 aa18.32■□□□□ 0.52
PSMA3-203ENST00000553665 PIAS4Q8N2W9 510 aaPredicted RBP17.77■□□□□ 0.44
PSMA3-203ENST00000553665 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
PSMA3-203ENST00000553665 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
PSMA3-203ENST00000553665 ADRA2BP18089 450 aa17.32■□□□□ 0.36
PSMA3-203ENST00000553665 NISCHQ9Y2I1 1504 aa16.54■□□□□ 0.24
PSMA3-203ENST00000553665 DMRT2Q9Y5R5 561 aa16.24■□□□□ 0.19
PSMA3-203ENST00000553665 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
PSMA3-203ENST00000553665 CACNB1Q02641 598 aaPredicted RBP16.06■□□□□ 0.16
PSMA3-203ENST00000553665 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
PSMA3-203ENST00000553665 RNF39Q9H2S5 420 aa15.58■□□□□ 0.08
PSMA3-203ENST00000553665 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
PSMA3-203ENST00000553665 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
PSMA3-203ENST00000553665 C1QBPQ07021 282 aaKnown RBP15.33■□□□□ 0.04
PSMA3-203ENST00000553665 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
PSMA3-203ENST00000553665 PPP4R3CPQ6ZMV5 832 aa15.1■□□□□ 0.01
PSMA3-203ENST00000553665 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
PSMA3-203ENST00000553665 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
PSMA3-203ENST00000553665 POTEHQ6S545 545 aa14.76□□□□□ -0.05
PSMA3-203ENST00000553665 ABCC9O60706 1549 aa14.76□□□□□ -0.05
PSMA3-203ENST00000553665 CCDC180Q9P1Z9 1646 aa14.72□□□□□ -0.05
PSMA3-203ENST00000553665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.54□□□□□ -0.08
PSMA3-203ENST00000553665 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
PSMA3-203ENST00000553665 DSG3P32926 999 aa14.33□□□□□ -0.12
PSMA3-203ENST00000553665 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
PSMA3-203ENST00000553665 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
PSMA3-203ENST00000553665 SPINK5Q9NQ38 1064 aaPredicted RBP14.17□□□□□ -0.14
PSMA3-203ENST00000553665 CAPN15O75808 1086 aa14.14□□□□□ -0.15
PSMA3-203ENST00000553665 DCAF8L2P0C7V8 631 aa14.07□□□□□ -0.16
PSMA3-203ENST00000553665 RB1CC1Q8TDY2 1594 aa14.02□□□□□ -0.16
PSMA3-203ENST00000553665 NACADO15069 1562 aa13.96□□□□□ -0.18
PSMA3-203ENST00000553665 PABPN1Q86U42 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
PSMA3-203ENST00000553665 ZNF219Q9P2Y4 722 aaPredicted RBP13.79□□□□□ -0.2
PSMA3-203ENST00000553665 APLP2Q06481 763 aa13.78□□□□□ -0.2
PSMA3-203ENST00000553665 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
PSMA3-203ENST00000553665 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
PSMA3-203ENST00000553665 ABCB7O75027 752 aa13.73□□□□□ -0.21
PSMA3-203ENST00000553665 ZCCHC6Q5VYS8 1495 aaKnown RBP13.7□□□□□ -0.22
PSMA3-203ENST00000553665 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
PSMA3-203ENST00000553665 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
PSMA3-203ENST00000553665 CHRDL2Q6WN34 429 aa13.64□□□□□ -0.23
PSMA3-203ENST00000553665 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
PSMA3-203ENST00000553665 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
PSMA3-203ENST00000553665 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
PSMA3-203ENST00000553665 BICRAQ9NZM4 1560 aa13.62□□□□□ -0.23
PSMA3-203ENST00000553665 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
PSMA3-203ENST00000553665 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
PSMA3-203ENST00000553665 KCNA4P22459 653 aa13.52□□□□□ -0.25
PSMA3-203ENST00000553665 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
PSMA3-203ENST00000553665 SAMD1Q6SPF0 538 aaPredicted RBP13.48□□□□□ -0.25
PSMA3-203ENST00000553665 SCRIBQ14160 1630 aa13.46□□□□□ -0.25
PSMA3-203ENST00000553665 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
PSMA3-203ENST00000553665 CC2D2AQ9P2K1 1620 aa13.29□□□□□ -0.28
PSMA3-203ENST00000553665 POLA2Q14181 598 aa13.28□□□□□ -0.28
PSMA3-203ENST00000553665 CECR2Q9BXF3 1484 aa13.28□□□□□ -0.28
PSMA3-203ENST00000553665 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
PSMA3-203ENST00000553665 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
PSMA3-203ENST00000553665 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
PSMA3-203ENST00000553665 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
PSMA3-203ENST00000553665 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
PSMA3-203ENST00000553665 HAX1O00165 279 aa13.06□□□□□ -0.32
PSMA3-203ENST00000553665 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
PSMA3-203ENST00000553665 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
PSMA3-203ENST00000553665 ZBTB12Q9Y330 459 aaPredicted RBP13.01□□□□□ -0.33
PSMA3-203ENST00000553665 SLC24A1O60721 1099 aa12.99□□□□□ -0.33
PSMA3-203ENST00000553665 PITPNM1O00562 1244 aa12.94□□□□□ -0.34
PSMA3-203ENST00000553665 NCAPD3P42695 1498 aa12.92□□□□□ -0.34
PSMA3-203ENST00000553665 ATAD2BQ9ULI0 1458 aa12.9□□□□□ -0.34
PSMA3-203ENST00000553665 EVX2Q03828 476 aa12.89□□□□□ -0.35
PSMA3-203ENST00000553665 SLC4A1APQ9BWU0 796 aaKnown RBP12.86□□□□□ -0.35
PSMA3-203ENST00000553665 SMARCA4P51532 1647 aa12.84□□□□□ -0.35
PSMA3-203ENST00000553665 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
PSMA3-203ENST00000553665 SMARCA2P51531 1590 aa12.82□□□□□ -0.36
PSMA3-203ENST00000553665 BAZ1AQ9NRL2 1556 aaPredicted RBP12.81□□□□□ -0.36
PSMA3-203ENST00000553665 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
PSMA3-203ENST00000553665 FOXD4L1Q9NU39 408 aa12.79□□□□□ -0.36
PSMA3-203ENST00000553665 HMGXB3Q12766 1538 aa12.77□□□□□ -0.37
PSMA3-203ENST00000553665 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
PSMA3-203ENST00000553665 BAZ1BQ9UIG0 1483 aaKnown RBP12.75□□□□□ -0.37
PSMA3-203ENST00000553665 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
PSMA3-203ENST00000553665 PEG3Q9GZU2 1588 aa12.71□□□□□ -0.37
PSMA3-203ENST00000553665 NESP48681 1621 aa12.7□□□□□ -0.38
PSMA3-203ENST00000553665 LHX8Q68G74 356 aa12.66□□□□□ -0.38
PSMA3-203ENST00000553665 C19orf67A6NJJ6 358 aa12.64□□□□□ -0.39
PSMA3-203ENST00000553665 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
PSMA3-203ENST00000553665 CUX2O14529 1486 aa12.64□□□□□ -0.39
PSMA3-203ENST00000553665 WIZO95785 1651 aa12.58□□□□□ -0.4
PSMA3-203ENST00000553665 GABBR2O75899 941 aa12.58□□□□□ -0.4
PSMA3-203ENST00000553665 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
PSMA3-203ENST00000553665 LAMC3Q9Y6N6 1575 aa12.56□□□□□ -0.4
PSMA3-203ENST00000553665 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
PSMA3-203ENST00000553665 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
PSMA3-203ENST00000553665 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
PSMA3-203ENST00000553665 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms