RNA–Protein interactions for RNA: ENST00000585375.1

GHDC-204, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-204ENST00000585375 NISCHQ9Y2I1 1504 aa39.84■■■■□ 3.97
GHDC-204ENST00000585375 CCDC180Q9P1Z9 1646 aa35.7■■■■□ 3.31
GHDC-204ENST00000585375 ABCC9O60706 1549 aa35.27■■■■□ 3.24
GHDC-204ENST00000585375 RB1CC1Q8TDY2 1594 aa33.81■■■■□ 3
GHDC-204ENST00000585375 NACADO15069 1562 aa33.66■■■□□ 2.98
GHDC-204ENST00000585375 MYO15BQ96JP2 1530 aa33.37■■■□□ 2.93
GHDC-204ENST00000585375 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
GHDC-204ENST00000585375 ZCCHC6Q5VYS8 1495 aaKnown RBP33.1■■■□□ 2.89
GHDC-204ENST00000585375 DCAF1Q9Y4B6 1507 aa33.01■■■□□ 2.87
GHDC-204ENST00000585375 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
GHDC-204ENST00000585375 PABPN1Q86U42 306 aaKnown RBP eCLIP32.83■■■□□ 2.85
GHDC-204ENST00000585375 DNAJC5BQ9UF47 199 aa32.79■■■□□ 2.84
GHDC-204ENST00000585375 BICRAQ9NZM4 1560 aa32.77■■■□□ 2.84
GHDC-204ENST00000585375 SHROOM4Q9ULL8 1493 aa32.51■■■□□ 2.79
GHDC-204ENST00000585375 SCRIBQ14160 1630 aa32.42■■■□□ 2.78
GHDC-204ENST00000585375 EIF4G1Q04637 1599 aaKnown RBP31.95■■■□□ 2.71
GHDC-204ENST00000585375 CC2D2AQ9P2K1 1620 aa31.93■■■□□ 2.7
GHDC-204ENST00000585375 CECR2Q9BXF3 1484 aa31.79■■■□□ 2.68
GHDC-204ENST00000585375 NCAPD3P42695 1498 aa31.06■■■□□ 2.56
GHDC-204ENST00000585375 SMARCA4P51532 1647 aa31.02■■■□□ 2.56
GHDC-204ENST00000585375 ATAD2BQ9ULI0 1458 aa30.96■■■□□ 2.55
GHDC-204ENST00000585375 SMARCA2P51531 1590 aa30.95■■■□□ 2.54
GHDC-204ENST00000585375 BAZ1AQ9NRL2 1556 aaPredicted RBP30.94■■■□□ 2.54
GHDC-204ENST00000585375 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
GHDC-204ENST00000585375 PEG3Q9GZU2 1588 aa30.78■■■□□ 2.52
GHDC-204ENST00000585375 BAZ1BQ9UIG0 1483 aaKnown RBP30.69■■■□□ 2.5
GHDC-204ENST00000585375 MROH2BQ7Z745 1585 aa30.66■■■□□ 2.5
GHDC-204ENST00000585375 ERCC6Q03468 1493 aa30.48■■■□□ 2.47
GHDC-204ENST00000585375 CUX2O14529 1486 aa30.4■■■□□ 2.46
GHDC-204ENST00000585375 NESP48681 1621 aa30.37■■■□□ 2.45
GHDC-204ENST00000585375 LAMC3Q9Y6N6 1575 aa30.33■■■□□ 2.45
GHDC-204ENST00000585375 WIZO95785 1651 aa30.29■■■□□ 2.44
GHDC-204ENST00000585375 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
GHDC-204ENST00000585375 PDS5BQ9NTI5 1447 aa30.13■■■□□ 2.41
GHDC-204ENST00000585375 CADPSQ9ULU8 1353 aa30.1■■■□□ 2.41
GHDC-204ENST00000585375 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
GHDC-204ENST00000585375 KIF21AQ7Z4S6 1674 aa30.04■■■□□ 2.4
GHDC-204ENST00000585375 TOP2AP11388 1531 aaKnown RBP29.99■■■□□ 2.39
GHDC-204ENST00000585375 DNAJC5Q9H3Z4 198 aa29.98■■■□□ 2.39
GHDC-204ENST00000585375 CFTRP13569 1480 aa29.83■■■□□ 2.37
GHDC-204ENST00000585375 MRC2Q9UBG0 1479 aa29.83■■■□□ 2.37
GHDC-204ENST00000585375 WDR62O43379 1518 aa29.77■■■□□ 2.36
GHDC-204ENST00000585375 CEP164Q9UPV0 1460 aa29.77■■■□□ 2.36
GHDC-204ENST00000585375 FANCD2Q9BXW9 1451 aa29.74■■■□□ 2.35
GHDC-204ENST00000585375 CCDC88BA6NC98 1476 aa29.6■■■□□ 2.33
GHDC-204ENST00000585375 PRDM2Q13029 1718 aa29.59■■■□□ 2.33
GHDC-204ENST00000585375 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
GHDC-204ENST00000585375 ABCC8Q09428 1581 aa29.25■■■□□ 2.27
GHDC-204ENST00000585375 TOPBP1Q92547 1522 aa29.21■■■□□ 2.27
GHDC-204ENST00000585375 IFT140Q96RY7 1462 aa29.18■■■□□ 2.26
GHDC-204ENST00000585375 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
GHDC-204ENST00000585375 ZNF608Q9ULD9 1512 aaPredicted RBP29.03■■■□□ 2.24
GHDC-204ENST00000585375 OSCARQ8IYS5 282 aa28.99■■■□□ 2.23
GHDC-204ENST00000585375 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
GHDC-204ENST00000585375 EIF4G3O43432 1585 aaKnown RBP28.93■■■□□ 2.22
GHDC-204ENST00000585375 POLA1P09884 1462 aaPredicted RBP28.93■■■□□ 2.22
GHDC-204ENST00000585375 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
GHDC-204ENST00000585375 CUX1P39880 1505 aa28.79■■■□□ 2.2
GHDC-204ENST00000585375 AQRO60306 1485 aaKnown RBP eCLIP28.79■■■□□ 2.2
GHDC-204ENST00000585375 SOGA1O94964 1423 aa28.79■■■□□ 2.2
GHDC-204ENST00000585375 FGD5Q6ZNL6 1462 aa28.78■■■□□ 2.2
GHDC-204ENST00000585375 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
GHDC-204ENST00000585375 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
GHDC-204ENST00000585375 TRIM41Q8WV44 630 aa28.69■■■□□ 2.18
GHDC-204ENST00000585375 TDRD9Q8NDG6 1382 aaKnown RBP28.65■■■□□ 2.18
GHDC-204ENST00000585375 CHD1O14646 1710 aa28.64■■■□□ 2.18
GHDC-204ENST00000585375 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
GHDC-204ENST00000585375 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
GHDC-204ENST00000585375 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
GHDC-204ENST00000585375 GRIN2BQ13224 1484 aa28.55■■■□□ 2.16
GHDC-204ENST00000585375 MAGI1Q96QZ7 1491 aaPredicted RBP28.55■■■□□ 2.16
GHDC-204ENST00000585375 SNAPC4Q5SXM2 1469 aa28.54■■■□□ 2.16
GHDC-204ENST00000585375 ARHGEF11O15085 1522 aa28.53■■■□□ 2.16
GHDC-204ENST00000585375 ABCA10Q8WWZ4 1543 aa28.52■■■□□ 2.16
GHDC-204ENST00000585375 FBLN2P98095 1184 aa28.51■■■□□ 2.15
GHDC-204ENST00000585375 GAPVD1Q14C86 1478 aa28.46■■■□□ 2.15
GHDC-204ENST00000585375 BIVM-ERCC5R4GMW8 1640 aa28.46■■■□□ 2.15
GHDC-204ENST00000585375 TOP2BQ02880 1626 aa28.45■■■□□ 2.14
GHDC-204ENST00000585375 WRNQ14191 1432 aaPredicted RBP eCLIP28.44■■■□□ 2.14
GHDC-204ENST00000585375 ABCA5Q8WWZ7 1642 aa28.44■■■□□ 2.14
GHDC-204ENST00000585375 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
GHDC-204ENST00000585375 SYNJ2O15056 1496 aa28.42■■■□□ 2.14
GHDC-204ENST00000585375 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
GHDC-204ENST00000585375 SYNJ1O43426 1573 aa28.38■■■□□ 2.13
GHDC-204ENST00000585375 CLASP1Q7Z460 1538 aa28.36■■■□□ 2.13
GHDC-204ENST00000585375 ARAP1Q96P48 1450 aa28.26■■■□□ 2.11
GHDC-204ENST00000585375 CYB5RLQ6IPT4 315 aa28.23■■■□□ 2.11
GHDC-204ENST00000585375 ADAMTS12P58397 1594 aa28.2■■■□□ 2.1
GHDC-204ENST00000585375 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
GHDC-204ENST00000585375 GRIN2AQ12879 1464 aa28.17■■■□□ 2.1
GHDC-204ENST00000585375 FHAD1B1AJZ9 1412 aa28.14■■■□□ 2.1
GHDC-204ENST00000585375 NUP160Q12769 1436 aa28.09■■■□□ 2.09
GHDC-204ENST00000585375 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
GHDC-204ENST00000585375 SHROOM2Q13796 1616 aa27.94■■■□□ 2.06
GHDC-204ENST00000585375 KIF27Q86VH2 1401 aa27.9■■■□□ 2.06
GHDC-204ENST00000585375 ERCC6L2Q5T890 1561 aa27.86■■■□□ 2.05
GHDC-204ENST00000585375 CUL7Q14999 1698 aa27.83■■■□□ 2.05
GHDC-204ENST00000585375 TRHP20396 242 aaPredicted RBP27.82■■■□□ 2.04
GHDC-204ENST00000585375 IGF1RP08069 1367 aa27.81■■■□□ 2.04
GHDC-204ENST00000585375 RUSC2Q8N2Y8 1516 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms